RNA–Protein interactions for RNA: ENST00000641539.1

C19orf48-215, Transcript of chromosome 19 open reading frame 48, humanhuman

Gene C19orf48, Length 717 nt, Biotype transcribed unitary pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf48-215ENST00000641539 TSC2P49815 1807 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 TNRC6BQ9UPQ9 1833 aaKnown RBP12.86□□□□□ -0.35
C19orf48-215ENST00000641539 TTC26A0AVF1 554 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 UPK3BL1B0FP48 263 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 UPK3BL2E5RIL1 263 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 TNFRSF10BO14763 440 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 SLC16A4O15374 487 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 CLDN3O15551 220 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 MAP3K13O43283 966 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 XPOTO43592 962 aaKnown RBP12.86□□□□□ -0.35
C19orf48-215ENST00000641539 ZIC2O95409 532 aaPredicted RBP12.86□□□□□ -0.35
C19orf48-215ENST00000641539 F11P03951 625 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 CLTAP09496 248 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 UBA7P41226 1012 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 MATR3P43243 847 aaKnown RBP eCLIP12.86□□□□□ -0.35
C19orf48-215ENST00000641539 ATXN3P54252 364 aaPredicted RBP12.86□□□□□ -0.35
C19orf48-215ENST00000641539 LILRA4P59901 499 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 PPP2R3AQ06190 1150 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 ZNF268Q14587 947 aaPredicted RBP12.86□□□□□ -0.35
C19orf48-215ENST00000641539 COL28A1Q2UY09 1125 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 C2orf27AQ580R0 203 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 ARMCX6Q7L4S7 300 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 MON1AQ86VX9 555 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 SYT12Q8IV01 421 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 DAW1Q8N136 415 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 TTC16Q8NEE8 873 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 MDGA1Q8NFP4 955 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 USP33Q8TEY7 942 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 OSCP1Q8WVF1 389 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 MRPS31Q92665 395 aaKnown RBP12.86□□□□□ -0.35
C19orf48-215ENST00000641539 ATP2A3Q93084 1043 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 ZCWPW1Q9H0M4 648 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 DDX19AQ9NUU7 478 aaKnown RBP12.86□□□□□ -0.35
C19orf48-215ENST00000641539 ATP6V1DQ9Y5K8 247 aa12.86□□□□□ -0.35
C19orf48-215ENST00000641539 HELZ2Q9BYK8 2649 aaKnown RBP12.85□□□□□ -0.35
C19orf48-215ENST00000641539 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 PPEF2O14830 753 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 F13A1P00488 732 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 CFIP05156 583 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 HAPLN1P10915 354 aaPredicted RBP12.85□□□□□ -0.35
C19orf48-215ENST00000641539 PTGER3P43115 390 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 IFNAR2P48551 515 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 SEC13P55735 322 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 MCL1Q07820 350 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 SCAPQ12770 1279 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 NR1H3Q13133 447 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 SLC39A14Q15043 492 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 ZNF423Q2M1K9 1284 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 HYIQ5T013 277 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 SLC23A3Q6PIS1 610 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 TMEFF1Q8IYR6 380 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 CCDC33Q8N5R6 958 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 SPPL2BQ8TCT7 592 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 C2orf15Q8WU43 125 aaKnown RBP12.85□□□□□ -0.35
C19orf48-215ENST00000641539 RLN3Q8WXF3 142 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 SPACA7Q96KW9 195 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 C17orf75Q9HAS0 396 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 TMEM74BQ9NUR3 256 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 ABI2Q9NYB9 513 aaPredicted RBP12.85□□□□□ -0.35
C19orf48-215ENST00000641539 CFAP45Q9UL16 551 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 SRPRBQ9Y5M8 271 aaKnown RBP12.85□□□□□ -0.35
C19orf48-215ENST00000641539 WNT6Q9Y6F9 365 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 ADAMTS9Q9P2N4 1935 aa12.85□□□□□ -0.35
C19orf48-215ENST00000641539 EIF4E1BA6NMX2 242 aaKnown RBP12.84□□□□□ -0.35
C19orf48-215ENST00000641539 SFI1A8K8P3 1242 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 LACTBL1A8MY62 500 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 ALDH1A2O94788 518 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 HMGA1P17096 107 aaKnown RBP12.84□□□□□ -0.35
C19orf48-215ENST00000641539 PAX3P23760 479 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 TXLNAP40222 546 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 P2RY2P41231 377 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 DPP6P42658 865 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 NASPP49321 788 aaPredicted RBP12.84□□□□□ -0.35
C19orf48-215ENST00000641539 FAM193AP78312 1265 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 FAM160A1Q05DH4 1040 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 SMARCB1Q12824 385 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 MAPK7Q13164 816 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 CRY1Q16526 586 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 IL17AQ16552 155 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 LMBRD2Q68DH5 695 aaPredicted RBP12.84□□□□□ -0.35
C19orf48-215ENST00000641539 ZPBP2Q6X784 338 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 RAB44Q7Z6P3 723 aaPredicted RBP12.84□□□□□ -0.35
C19orf48-215ENST00000641539 THEM5Q8N1Q8 247 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 SPRYD3Q8NCJ5 442 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 OLIG1Q8TAK6 271 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 FNBP1Q96RU3 617 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 NTPCRQ9BSD7 190 aaKnown RBP12.84□□□□□ -0.35
C19orf48-215ENST00000641539 RUSC1Q9BVN2 902 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 TIPINQ9BVW5 301 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 GTPBP2Q9BX10 602 aaKnown RBP12.84□□□□□ -0.35
C19orf48-215ENST00000641539 KCND2Q9NZV8 630 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 MBD1Q9UIS9 605 aaPredicted RBP12.84□□□□□ -0.35
C19orf48-215ENST00000641539 KCNG1Q9UIX4 513 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 DSEQ9UL01 958 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 MMP17Q9ULZ9 603 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 MAGED2Q9UNF1 606 aaPredicted RBP12.84□□□□□ -0.35
C19orf48-215ENST00000641539 CLIC4Q9Y696 253 aa12.84□□□□□ -0.35
C19orf48-215ENST00000641539 ATXN2Q99700 1313 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms