RNA–Protein interactions for RNA: ENST00000640900.1

SCARB2-225, Transcript of scavenger receptor class B member 2, humanhuman

TSL 2

Gene SCARB2, Length 531 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-225ENST00000640900 PCDHB18PQ96TA0 734 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 CHP1Q99653 195 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 SLC28A3Q9HAS3 691 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 CSNK1G1Q9HCP0 422 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 ABCB6Q9NP58 842 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 ALG13Q9NP73 1137 aaKnown RBP9.69□□□□□ -0.86
SCARB2-225ENST00000640900 TLR9Q9NR96 1032 aa9.69□□□□□ -0.86
SCARB2-225ENST00000640900 PUF60Q9UHX1 559 aaKnown RBP9.69□□□□□ -0.86
SCARB2-225ENST00000640900 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.69□□□□□ -0.86
SCARB2-225ENST00000640900 DDX3XO00571 662 aaKnown RBP eCLIP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 CALCAP01258 141 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 CYP1A1P04798 512 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 URODP06132 367 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 PLEKP08567 350 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 CFHP08603 1231 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 CNPP09543 421 aaKnown RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 UNGP13051 313 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 ACAT1P24752 427 aaKnown RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 GNA15P30679 374 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 MAGEA11P43364 429 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 CCZ1BP86790 482 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 CCZ1P86791 482 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 TSPY1Q01534 308 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 CREMQ03060 361 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 ORC1Q13415 861 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 GPM6BQ13491 265 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 MAPRE1Q15691 268 aaKnown RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 NFE2Q16621 373 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 ZNF394Q53GI3 561 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 SGO2Q562F6 1265 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 PPP1R26Q5T8A7 1209 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 TPGS2Q68CL5 300 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 GPR153Q6NV75 609 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 TTC30AQ86WT1 665 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 TMTC1Q8IUR5 882 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 ANKRD52Q8NB46 1076 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 ZNF461Q8TAF7 563 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 C2orf15Q8WU43 125 aaKnown RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 SLC20A1Q8WUM9 679 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 SLC35F5Q8WV83 523 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 ANP32BQ92688 251 aaKnown RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 PCED1BQ96HM7 432 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 AGPAT1Q99943 283 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 LPIN3Q9BQK8 851 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 UBXN6Q9BZV1 441 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 TTYH1Q9H313 450 aaPredicted RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 HAUS4Q9H6D7 363 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 MRPL17Q9NRX2 175 aaKnown RBP9.68□□□□□ -0.86
SCARB2-225ENST00000640900 TMEM30AQ9NV96 361 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 GTF3C4Q9UKN8 822 aa9.68□□□□□ -0.86
SCARB2-225ENST00000640900 WDR27A2RRH5 827 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 HIDE1A8MVS5 230 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 HHLA1C9JL84 531 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 SOX1O00570 391 aaPredicted RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 TEX28O15482 410 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 MICAL2O94851 1124 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CXCL14O95715 111 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 LSM8O95777 96 aaKnown RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 MMEP08473 750 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 GZMAP12544 262 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 SKILP12757 684 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CCDC130P13994 396 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 ATF2P15336 505 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 BRD2P25440 801 aaKnown RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 OR1D2P34982 312 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 IRS1P35568 1242 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 GPD2P43304 727 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 NDUFV1P49821 464 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 PDE6CP51160 858 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 PSMC1P62191 440 aaKnown RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 ROR1Q01973 937 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 KLHL30Q0D2K2 578 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 KCNC3Q14003 757 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 SMC1AQ14683 1233 aaKnown RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 BMS1Q14692 1282 aaKnown RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 MDH1BQ5I0G3 518 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CYP26C1Q6V0L0 522 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 TRIM72Q6ZMU5 477 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 MAMSTRQ6ZN01 415 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 RTL10Q7L3V2 364 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CEP57Q86XR8 500 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 PALB2Q86YC2 1186 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CCDC170Q8IYT3 715 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 DCP1BQ8IZD4 617 aaKnown RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 ZMIZ2Q8NF64 920 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 STK32AQ8WU08 396 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 SLC22A17Q8WUG5 538 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 AUTS2Q8WXX7 1259 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 MYLPFQ96A32 169 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CYFIP2Q96F07 1278 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CEP295NLQ96MC4 621 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 HEXIM2Q96MH2 286 aaKnown RBP9.67□□□□□ -0.86
SCARB2-225ENST00000640900 KLHL5Q96PQ7 755 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 TCF25Q9BQ70 676 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 MFRPQ9BY79 579 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 DUSP16Q9BY84 665 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 ZNF518BQ9C0D4 1074 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 DNAI2Q9GZS0 605 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 CRISPLD1Q9H336 500 aa9.67□□□□□ -0.86
SCARB2-225ENST00000640900 KCNF1Q9H3M0 494 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms