RNA–Protein interactions for RNA: ENST00000639811.1

NECAP1-219, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5 BASIC

Gene NECAP1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-219ENST00000639811 PPP1R26Q5T8A7 1209 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-219ENST00000639811 C9orf57Q5W0N0 161 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 SYDE1Q6ZW31 735 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-219ENST00000639811 PRUNE1Q86TP1 453 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 BEST2Q8NFU1 509 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 FNIP1Q8TF40 1166 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 GRK7Q8WTQ7 553 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 SOCS4Q8WXH5 440 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 CCDC114Q96M63 670 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 ZIC5Q96T25 663 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 TRIM6Q9C030 488 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-219ENST00000639811 PABPC3Q9H361 631 aaKnown RBP10.36□□□□□ -0.75
NECAP1-219ENST00000639811 SEMA4AQ9H3S1 761 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 FAM124BQ9H5Z6 455 aaPredicted RBP10.36□□□□□ -0.75
NECAP1-219ENST00000639811 AAASQ9NRG9 546 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 HOMER3Q9NSC5 361 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 KLK14Q9P0G3 267 aa10.36□□□□□ -0.75
NECAP1-219ENST00000639811 MTRF1LQ9UGC7 380 aaKnown RBP10.36□□□□□ -0.75
NECAP1-219ENST00000639811 SMIM28A0A1B0GU29 152 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 LRRD1A4D1F6 860 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 HMGB1P1B2RPK0 211 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-219ENST00000639811 TULP2O00295 520 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 LIASO43766 372 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 PTPN7P35236 360 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 CDKN2BP42772 138 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 ATP1A2P50993 1020 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 CRYBB1P53674 252 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-219ENST00000639811 GOLGA7BQ2TAP0 167 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 EMC10Q5UCC4 262 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 TRNP1Q6NT89 227 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 LRRC31Q6UY01 552 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 KDM7AQ6ZMT4 941 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 ACOT1Q86TX2 421 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 TTC39CQ8N584 583 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 LRRC52Q8N7C0 313 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 PIWIL1Q96J94 861 aaKnown RBP10.35□□□□□ -0.75
NECAP1-219ENST00000639811 LPIN3Q9BQK8 851 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 CENPHQ9H3R5 247 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 ZWILCHQ9H900 591 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 DDX56Q9NY93 547 aaKnown RBP10.35□□□□□ -0.75
NECAP1-219ENST00000639811 KIAA1257Q9ULG3 409 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 PDCD11Q14690 1871 aaKnown RBP10.35□□□□□ -0.75
NECAP1-219ENST00000639811 GOLGA6L10A6NI86 522 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 E5RJQ4 531 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 HCRTO43612 131 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 GAS8O95995 478 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 NUDT17P0C025 328 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 AKR1A1P14550 325 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 ITIH2P19823 946 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 NR1D1P20393 614 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 CHKAP35790 457 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 CETN2P41208 172 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 VPS41P49754 854 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 INHBEP58166 350 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 COPS2P61201 443 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 CALCOCO2Q13137 446 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 SLC29A2Q14542 456 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 SOWAHAQ2M3V2 549 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 SMTNL2Q2TAL5 461 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 PKDCCQ504Y2 493 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 XKR4Q5GH76 650 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 TFDP3Q5H9I0 405 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 KCNT1Q5JUK3 1230 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 FAM102AQ5T9C2 384 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-219ENST00000639811 TTC19Q6DKK2 380 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-219ENST00000639811 FAM183BPQ6ZVS7 135 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 POLNQ7Z5Q5 900 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 TTC30AQ86WT1 665 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 C7orf31Q8N865 590 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 ARRDC4Q8NCT1 418 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 SMG8Q8ND04 991 aaKnown RBP10.35□□□□□ -0.75
NECAP1-219ENST00000639811 SNF8Q96H20 258 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 KATNAL1Q9BW62 490 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 CAPS2Q9BXY5 557 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 FAM129AQ9BZQ8 928 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 ARHGAP39Q9C0H5 1083 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 ZMYND15Q9H091 742 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 FEZ2Q9UHY8 353 aaPredicted RBP10.35□□□□□ -0.75
NECAP1-219ENST00000639811 DNPEPQ9ULA0 475 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 GRIN2DO15399 1336 aa10.35□□□□□ -0.75
NECAP1-219ENST00000639811 PIRO00625 290 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 SPTLC1O15269 473 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 RPS6KA5O75582 802 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 GABBR2O75899 941 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 TJP3O95049 919 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 C6orf222P0C671 652 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-219ENST00000639811 RARGP13631 454 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 KLRC2P26717 231 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 PSMC4P43686 418 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 RGS7P49802 495 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 IRAK1P51617 712 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 ITGA8P53708 1063 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 SOX4Q06945 474 aaPredicted RBP10.34□□□□□ -0.75
NECAP1-219ENST00000639811 TAF5Q15542 800 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 RAB6CQ53S08 254 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 PMF1Q6P1K2 205 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 GLIS1Q8NBF1 620 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 HAUS1Q96CS2 278 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 RAB6CQ9H0N0 254 aa10.34□□□□□ -0.75
NECAP1-219ENST00000639811 DPEP3Q9H4B8 488 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms