RNA–Protein interactions for RNA: ENST00000638031.1

CHRNA7-233, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 1,133 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-233ENST00000638031 TMEM30AQ9NV96 361 aa20.13■□□□□ 0.81
CHRNA7-233ENST00000638031 CDH9Q9ULB4 789 aa20.13■□□□□ 0.81
CHRNA7-233ENST00000638031 COL4A2P08572 1712 aa20.13■□□□□ 0.81
CHRNA7-233ENST00000638031 PTPRZ1P23471 2315 aaPredicted RBP20.13■□□□□ 0.81
CHRNA7-233ENST00000638031 CACNA1IQ9P0X4 2223 aa20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 FAM170BA6NMN3 283 aa20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 TARSP26639 723 aaKnown RBP20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 WEE1P30291 646 aa20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 GNL1P36915 607 aaPredicted RBP20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 CDH8P55286 799 aa20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 NUCB2P80303 420 aa20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 FCHO2Q0JRZ9 810 aa20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 MAML2Q8IZL2 1156 aaPredicted RBP20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 DNASE1L2Q92874 299 aa20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 ERCC4Q92889 916 aaPredicted RBP20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 MYLPFQ96A32 169 aa20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 SDCBP2Q9H190 292 aa20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 NXF1Q9UBU9 619 aaKnown RBP20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 MAGED2Q9UNF1 606 aaPredicted RBP20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 R3HCC1Q9Y3T6 440 aaKnown RBP20.12■□□□□ 0.81
CHRNA7-233ENST00000638031 SLC38A8A6NNN8 435 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 AKAP3O75969 853 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 NOL4O94818 638 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 FGF19O95750 216 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 FAM163BP0C2L3 166 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 CACNA2D1P54289 1103 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 TRPC3Q13507 836 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 ZCWPW2Q504Y3 356 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 SPATA2LQ8IUW3 424 aaPredicted RBP20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 GUF1Q8N442 669 aaKnown RBP20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 RIN3Q8TB24 985 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 DEPDC1BQ8WUY9 529 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 PCED1BQ96HM7 432 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 FUBP3Q96I24 572 aaKnown RBP eCLIP20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 ZFYVE19Q96K21 471 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 MYRFLQ96LU7 910 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 SMYD3Q9H7B4 428 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 VRTNQ9H8Y1 702 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 TRPV5Q9NQA5 729 aa20.11■□□□□ 0.81
CHRNA7-233ENST00000638031 PRR23AA6NEV1 266 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 ZNF263O14978 683 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 CSH1P0DML2 217 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 CSH2P0DML3 217 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 BDNFP23560 247 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 CDC25CP30307 473 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 ATICP31939 592 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 MAGEA11P43364 429 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 RAP1GAPP47736 663 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 RPL10AP62906 217 aaKnown RBP20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 NCOA4Q13772 614 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 UBXN2BQ14CS0 331 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 NFIL3Q16649 462 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 ZACNQ401N2 412 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 CEP135Q66GS9 1140 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 TXNDC8Q6A555 127 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 SV2AQ7L0J3 742 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 SCN4BQ8IWT1 228 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 CMTM8Q8IZV2 173 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 MAB21L3Q8N8X9 362 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 OR6B3Q8NGW1 331 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 MYCBPAPQ8TBZ2 947 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 TMC2Q8TDI7 906 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 IRF7Q92985 503 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 MAGEC2Q9UBF1 373 aaPredicted RBP20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 CCL26Q9Y258 94 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 F5P12259 2224 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 MIA3Q5JRA6 1907 aa20.1■□□□□ 0.81
CHRNA7-233ENST00000638031 FAM186AA6NE01 2351 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 CALUO43852 315 aaPredicted RBP20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 PHACTR2O75167 634 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 PTPN1P18031 435 aaKnown RBP20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 MCCD1P59942 119 aaPredicted RBP20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 USP46P62068 366 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 BIRC3Q13489 604 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 TAF12Q16514 161 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 ARHGAP15Q53QZ3 475 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 MDH1BQ5I0G3 518 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 WDR44Q5JSH3 913 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 E2F7Q96AV8 911 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 CLDN23Q96B33 292 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 EEF2KMTQ96G04 330 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 TRMT2BQ96GJ1 504 aaKnown RBP20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 SLC22A12Q96S37 553 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 OSBPL6Q9BZF3 934 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 SNX25Q9H3E2 840 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 ZNF292O60281 2723 aa20.09■□□□□ 0.81
CHRNA7-233ENST00000638031 CHADO15335 359 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 NR2F2P24468 414 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 SOX9P48436 509 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 AP3M2P53677 418 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 TNNC1P63316 161 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 CYP27A1Q02318 531 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 PPP3CAQ08209 521 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 SPOPLQ6IQ16 392 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 PAQR9Q6ZVX9 377 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 C1orf210Q8IVY1 113 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 TTC8Q8TAM2 541 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 SPATA20Q8TB22 786 aa20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 USP13Q92995 863 aaPredicted RBP20.08■□□□□ 0.81
CHRNA7-233ENST00000638031 NKD2Q969F2 451 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms