RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 SHDQ96IW2 340 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 TASP1Q9H6P5 420 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 SMYD3Q9H7B4 428 aa18.97■□□□□ 0.63
PNKP-230ENST00000638016 NXF1Q9UBU9 619 aaKnown RBP18.97■□□□□ 0.63
PNKP-230ENST00000638016 ANAPC1Q9H1A4 1944 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 SLC38A8A6NNN8 435 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 PDXKO00764 312 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 ZNF263O14978 683 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 C4BPAP04003 597 aaKnown RBP18.96■□□□□ 0.63
PNKP-230ENST00000638016 MYL1P05976 194 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 BDNFP23560 247 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 CDC25CP30307 473 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 TRPC3Q13507 836 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 PNOCQ13519 176 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 ARHGAP15Q53QZ3 475 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 MDH1BQ5I0G3 518 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 C1orf220Q5T0J3 134 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 TXNDC8Q6A555 127 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 SCARA5Q6ZMJ2 495 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 DPH6Q7L8W6 267 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 SLC9A9Q8IVB4 645 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 OR6B3Q8NGW1 331 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 SPATA18Q8TC71 538 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 DNASE1L2Q92874 299 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 GPR88Q9GZN0 384 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 SDCBP2Q9H190 292 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.96■□□□□ 0.63
PNKP-230ENST00000638016 CDH9Q9ULB4 789 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 NDRG2Q9UN36 371 aaKnown RBP18.96■□□□□ 0.63
PNKP-230ENST00000638016 CCL26Q9Y258 94 aa18.96■□□□□ 0.63
PNKP-230ENST00000638016 PHACTR2O75167 634 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 CLSTN1O94985 981 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 CACNA2D1P54289 1103 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 CDH8P55286 799 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 TNNC1P63316 161 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 CYP27A1Q02318 531 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 FZD5Q13467 585 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 CFAP221Q4G0U5 840 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 MAML2Q8IZL2 1156 aaPredicted RBP18.95■□□□□ 0.62
PNKP-230ENST00000638016 FMR1NBQ8N0W7 255 aaPredicted RBP18.95■□□□□ 0.62
PNKP-230ENST00000638016 MAB21L3Q8N8X9 362 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 IRF7Q92985 503 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 PCED1BQ96HM7 432 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 GCNAQ96QF7 691 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 ABCB6Q9NP58 842 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 TMEM30AQ9NV96 361 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 PIAS3Q9Y6X2 628 aa18.95■□□□□ 0.62
PNKP-230ENST00000638016 AKAP3O75969 853 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 NOL4O94818 638 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 FGF19O95750 216 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 CSH1P0DML2 217 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 CSH2P0DML3 217 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 GNL1P36915 607 aaPredicted RBP18.94■□□□□ 0.62
PNKP-230ENST00000638016 CLDN10P78369 228 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 TNK2Q07912 1038 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 FCHO2Q0JRZ9 810 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 NCOA4Q13772 614 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 SPOPLQ6IQ16 392 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 ASCL5Q7RTU5 278 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 YAF2Q8IY57 180 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 ZNF687Q8N1G0 1237 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 EEF2KMTQ96G04 330 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 SNX25Q9H3E2 840 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 GTSE1Q9NYZ3 720 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 TRAF3IP3Q9Y228 551 aa18.94■□□□□ 0.62
PNKP-230ENST00000638016 RIF1Q5UIP0 2472 aaKnown RBP18.94■□□□□ 0.62
PNKP-230ENST00000638016 CLDN5O00501 218 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 DPYSL4O14531 572 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 GFRA3O60609 400 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 TACC1O75410 805 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 TRIM49P0CI25 452 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 TRIM49CP0CI26 452 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 NBL1P41271 181 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 USP46P62068 366 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 RPL10AP62906 217 aaKnown RBP18.93■□□□□ 0.62
PNKP-230ENST00000638016 ORC1Q13415 861 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 ZNF699Q32M78 642 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 WDR44Q5JSH3 913 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 ZNF852Q6ZMS4 543 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 C1orf210Q8IVY1 113 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 CMTM8Q8IZV2 173 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 SYAP1Q96A49 352 aaPredicted RBP18.93■□□□□ 0.62
PNKP-230ENST00000638016 FUBP3Q96I24 572 aaKnown RBP eCLIP18.93■□□□□ 0.62
PNKP-230ENST00000638016 SLC22A12Q96S37 553 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 ZNF518BQ9C0D4 1074 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 MAGEC2Q9UBF1 373 aaPredicted RBP18.93■□□□□ 0.62
PNKP-230ENST00000638016 R4GN57 208 aa18.93■□□□□ 0.62
PNKP-230ENST00000638016 A8MXQ7 604 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 CHADO15335 359 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 CALUO43852 315 aaPredicted RBP18.92■□□□□ 0.62
PNKP-230ENST00000638016 STAU1O95793 577 aaKnown RBP18.92■□□□□ 0.62
PNKP-230ENST00000638016 NR2F2P24468 414 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 CCNE1P24864 410 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 NUCB2P80303 420 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 KCNB1Q14721 858 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 TXNDC11Q6PKC3 985 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 C4orf50Q6ZRC1 276 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 SV2AQ7L0J3 742 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 ENGASEQ8NFI3 743 aa18.92■□□□□ 0.62
PNKP-230ENST00000638016 MYCBPAPQ8TBZ2 947 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms