RNA–Protein interactions for RNA: ENST00000637981.1

CACNA1A-256, Transcript of calcium voltage-gated channel subunit alpha1 A, human

TSL 5

Gene CACNA1A, Length 1,346 nt, Biotype retained intron.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-256	ENST00000637981	YIPF1	Q9Y548	306 aa		10.19	□□□□□ -0.78
CACNA1A-256	ENST00000637981	F5	P12259	2224 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	MYBPHL	A2RUH7	354 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ZNF233	A6NK53	670 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SPECC1L-ADORA2A	F8WAN1	911 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	TGFB1I1	O43294	461 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	XPOT	O43592	962 aa	Known RBP	10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	EXTL3	O43909	919 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CCDC192	P0DO97	292 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	PML	P29590	882 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	HOXC13	P31276	330 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CTH	P32929	405 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	HOXD13	P35453	343 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	LIMK1	P53667	647 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	FKBP3	Q00688	224 aa	Known RBP	10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	YWHAH	Q04917	246 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	PAK1	Q13153	545 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	PLD1	Q13393	1074 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	PON2	Q15165	354 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SF3A2	Q15428	464 aa	Known RBP	10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SURF1	Q15526	300 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CCDC6	Q16204	474 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	STX1A	Q16623	288 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	STXBP5	Q5T5C0	1151 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	N4BP2L1	Q5TBK1	243 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CENPP	Q6IPU0	288 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SLC39A4	Q6P5W5	647 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	WDR5B	Q86VZ2	330 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	RALGPS2	Q86X27	583 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	TMC8	Q8IU68	726 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SLC9A9	Q8IVB4	645 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ARID3B	Q8IVW6	561 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	GPD1L	Q8N335	351 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	C12orf50	Q8NA57	414 aa	Predicted RBP	10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ZFYVE19	Q96K21	471 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	PGLYRP2	Q96PD5	576 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	LRRC3	Q9BY71	257 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	NAT10	Q9H0A0	1025 aa	Known RBP	10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ARRDC1-AS1	Q9H2J1	176 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	GTSE1	Q9NYZ3	720 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	HSPBP1	Q9NZL4	362 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	TMEM63C	Q9P1W3	806 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	PCDHB8	Q9UN66	801 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	MAPK8IP1	Q9UQF2	711 aa		10.18	□□□□□ -0.78
CACNA1A-256	ENST00000637981	DPYSL4	O14531	572 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CETN3	O15182	167 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CLIC2	O15247	247 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	EXOC3	O60645	756 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	IL18RAP	O95256	599 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	VNN2	O95498	520 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	NR3C1	P04150	777 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	OR4Q2	P0C623	313 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	NR2F2	P24468	414 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ERCC5	P28715	1186 aa	Predicted RBP	10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ADSS	P30520	456 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	HOXA6	P31267	233 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	EPHB3	P54753	998 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SHC2	P98077	582 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	PPP2R3A	Q06190	1150 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	DUSP4	Q13115	394 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ADAM9	Q13443	819 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CCIN	Q13939	588 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ARHGAP29	Q52LW3	1261 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	KLHL10	Q6JEL2	608 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	NT5DC4	Q86YG4	428 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SMYD4	Q8IYR2	804 aa	Predicted RBP	10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	BEST2	Q8NFU1	509 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	NELFB	Q8WX92	580 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CBWD1	Q9BRT8	395 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ANP32E	Q9BTT0	268 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	DNAJC25	Q9H1X3	360 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CRISPLD1	Q9H336	500 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ASB7	Q9H672	318 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	RXFP3	Q9NSD7	469 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	TUBGCP4	Q9UGJ1	667 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	RWDD2A	Q9UIY3	292 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	TIMM13	Q9Y5L4	95 aa	Predicted RBP	10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CFAP47	Q6ZTR5	3102 aa		10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	MAP1B	P46821	2468 aa	Known RBP	10.17	□□□□□ -0.78
CACNA1A-256	ENST00000637981	PPP1R3G	B7ZBB8	358 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981		M0QZQ0	153 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	TM4SF5	O14894	197 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	MAPK13	O15264	365 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	RPP40	O75818	363 aa	Known RBP	10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	OAZ2	O95190	189 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CAVIN2	O95810	425 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ZNF806	P0C7X5	589 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	BMP6	P22004	513 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	ALDH1A3	P47895	512 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	PXN	P49023	591 aa	Predicted RBP	10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CYP2J2	P51589	502 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	TNK2	Q07912	1038 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	TPD52L1	Q16890	204 aa	Predicted RBP	10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SLC10A6	Q3KNW5	377 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SEZ6	Q53EL9	994 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	GAREM2	Q75VX8	874 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	CACNA2D4	Q7Z3S7	1137 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	TMEM130	Q8N3G9	435 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	SYNPO	Q8N3V7	929 aa		10.16	□□□□□ -0.78
CACNA1A-256	ENST00000637981	NOC3L	Q8WTT2	800 aa	Known RBP	10.16	□□□□□ -0.78

Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms