RNA–Protein interactions for RNA: ENST00000637786.1

CHRNA7-231, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 1 (best)

Gene CHRNA7, Length 383 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-231ENST00000637786 VSTM1Q6UX27 236 aa23.78■■□□□ 1.4
CHRNA7-231ENST00000637786 CACNA2D4Q7Z3S7 1137 aa23.78■■□□□ 1.4
CHRNA7-231ENST00000637786 C12orf29Q8N999 325 aa23.78■■□□□ 1.4
CHRNA7-231ENST00000637786 HNRNPABQ99729 332 aaKnown RBP23.78■■□□□ 1.4
CHRNA7-231ENST00000637786 B3GNT5Q9BYG0 378 aa23.78■■□□□ 1.4
CHRNA7-231ENST00000637786 CYP4F11Q9HBI6 524 aa23.78■■□□□ 1.4
CHRNA7-231ENST00000637786 NLRC4Q9NPP4 1024 aa23.78■■□□□ 1.4
CHRNA7-231ENST00000637786 REV3LO60673 3130 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 A0A1W2PQJ5 194 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 LINC01565O15544 149 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 ZMYND10O75800 440 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 SEC24AO95486 1093 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 C8AP07357 584 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 SPATA31D3P0C874 917 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 HOXB8P17481 243 aaPredicted RBP23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 USP8P40818 1118 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 BPIFB4P59827 614 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 CYP27A1Q02318 531 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 DUSP4Q13115 394 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 STILQ15468 1287 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 SGO2Q562F6 1265 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 SPECC1LQ69YQ0 1117 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 SPATA31D4Q6ZUB0 917 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 FMNL3Q8IVF7 1028 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 VSTM4Q8IW00 320 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 FUKQ8N0W3 1084 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 CYFIP2Q96F07 1278 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 MRFAP1L1Q96HT8 127 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 LPIN3Q9BQK8 851 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 CRISPLD1Q9H336 500 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 FAM49BQ9NUQ9 324 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 ZDHHC7Q9NXF8 308 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 INSL5Q9Y5Q6 135 aa23.77■■□□□ 1.4
CHRNA7-231ENST00000637786 MYH10P35580 1976 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 POU2F2P09086 479 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 HNRNPA1P09651 372 aaKnown RBP eCLIP23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 HAPLN1P10915 354 aaPredicted RBP23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 SOX5P35711 763 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 STAT1P42224 750 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 RBM10P98175 930 aaKnown RBP23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 PLD1Q13393 1074 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 PAQR9Q6ZVX9 377 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 FAM35AQ86V20 835 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 CMASQ8NFW8 434 aaPredicted RBP23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 SLC7A14Q8TBB6 771 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 SLC2A14Q8TDB8 520 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 SMARCD1Q96GM5 515 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 CEP295NLQ96MC4 621 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 SFXN1Q9H9B4 322 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 CLDND1Q9NY35 253 aa23.76■■□□□ 1.39
CHRNA7-231ENST00000637786 CCDC130P13994 396 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 CD19P15391 556 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 CYP2F1P24903 491 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 ZNF75DP51815 510 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 PTK2Q05397 1052 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 TRIM14Q14142 442 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 CCDC85BQ15834 202 aaPredicted RBP23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 MGAT5BQ3V5L5 792 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 PPM1LQ5SGD2 360 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 PPP1R26Q5T8A7 1209 aaPredicted RBP23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 ANKRD54Q6NXT1 300 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 TTC9BQ8N6N2 239 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 BAP1Q92560 729 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 MED10Q9BTT4 135 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 RHOBTB2Q9BYZ6 727 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 ZNF518BQ9C0D4 1074 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 SLC27A5Q9Y2P5 690 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 YIPF1Q9Y548 306 aa23.75■■□□□ 1.39
CHRNA7-231ENST00000637786 O00370 1275 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 CYP26A1O43174 497 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 TBX10O75333 385 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 BDNFP23560 247 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 CLCN1P35523 988 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 LTBRP36941 435 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 RPL10AP62906 217 aaKnown RBP23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 MEA1Q16626 185 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 CYP26C1Q6V0L0 522 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 TFAP2BQ92481 460 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 SEPT5Q99719 369 aaPredicted RBP23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 CLEC1BQ9P126 229 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 CAPN11Q9UMQ6 739 aa23.74■■□□□ 1.39
CHRNA7-231ENST00000637786 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 CLDN5O00501 218 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 TRIM66O15016 1216 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 MED7O43513 233 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 FAM200BP0CF97 657 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 PNMA6AP0CW24 399 aaPredicted RBP23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 GNA15P30679 374 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 ALDH1A3P47895 512 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 CNGA2Q16280 664 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 LCLAT1Q6UWP7 414 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 MAFAQ8NHW3 353 aaPredicted RBP23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 NUCKS1Q9H1E3 243 aaKnown RBP23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 CSNK1G1Q9HCP0 422 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 KRT82Q9NSB4 513 aa23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 WDR3Q9UNX4 943 aaKnown RBP eCLIP23.73■■□□□ 1.39
CHRNA7-231ENST00000637786 SPDYE4A6NLX3 237 aa23.72■■□□□ 1.39
CHRNA7-231ENST00000637786 LRG1P02750 347 aa23.72■■□□□ 1.39
CHRNA7-231ENST00000637786 GYPCP04921 128 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms