RNA–Protein interactions for RNA: ENST00000637721.1

SYNGAP1-224, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 190 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-224ENST00000637721 FOXD4L3Q6VB84 417 aaPredicted RBP14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 ERMP1Q7Z2K6 904 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 MON1AQ86VX9 555 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 CBWD2Q8IUF1 395 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 SPATA2LQ8IUW3 424 aaPredicted RBP14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 C12orf56Q8IXR9 622 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 SPEM1Q8N4L4 309 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 FSIP1Q8NA03 581 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 XXYLT1Q8NBI6 393 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 GOLGA5Q8TBA6 731 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 EXOC4Q96A65 974 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 FNBP1Q96RU3 617 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 PKMYT1Q99640 499 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 SLC46A2Q9BY10 475 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 EPC1Q9H2F5 836 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 AGPAT3Q9NRZ7 376 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 TMLHEQ9NVH6 421 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 EHD2Q9NZN4 543 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 CDH9Q9ULB4 789 aa14.09□□□□□ -0.15
SYNGAP1-224ENST00000637721 SPECC1L-ADORA2AF8WAN1 911 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 PRAMEF12O95522 483 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 CTHP32929 405 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 HOXD13P35453 343 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 ID4P47928 161 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 CXCL12P48061 93 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 PDE6CP51160 858 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 SOWAHAQ2M3V2 549 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 ITPRIPL2Q3MIP1 535 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 RESP18Q5W5W9 173 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 CEP57L1Q8IYX8 460 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 SCFD1Q8WVM8 642 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 HPS3Q969F9 1004 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 TDP1Q9NUW8 608 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 GTSE1Q9NYZ3 720 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 GTF3C4Q9UKN8 822 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 PCDHA7Q9UN72 937 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 ATP6V1DQ9Y5K8 247 aa14.08□□□□□ -0.16
SYNGAP1-224ENST00000637721 SLC38A8A6NNN8 435 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 TGFB1I1O43294 461 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 TACC1O75410 805 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 STAU1O95793 577 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 MYL1P05976 194 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 TDGF1P13385 188 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 PFKLP17858 780 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 TNNI1P19237 187 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 WARSP23381 471 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 ACAT1P24752 427 aaKnown RBP14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 CYP2F1P24903 491 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 CNR2P34972 360 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 AP3M2P53677 418 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 PSMD6Q15008 389 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 LMBRD2Q68DH5 695 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 CC2D1AQ6P1N0 951 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 TRAPPC11Q7Z392 1133 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 TMEM150AQ86TG1 271 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 OSTM1Q86WC4 334 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 MAB21L3Q8N8X9 362 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 GLIS3Q8NEA6 775 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 OR5B17Q8NGF7 314 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 TMEM174Q8WUU8 243 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 CHAMP1Q96JM3 812 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 SPATA17Q96L03 361 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 LRRC3BQ96PB8 259 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 CGRRF1Q99675 332 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 FAM83CQ9BQN1 747 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 SYT15Q9BQS2 421 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 MAGEC2Q9UBF1 373 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 RCOR1Q9UKL0 485 aa14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 MAGED2Q9UNF1 606 aaPredicted RBP14.07□□□□□ -0.16
SYNGAP1-224ENST00000637721 PTPRDP23468 1912 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 GREB1Q4ZG55 1949 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 DLATP10515 647 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 SDHBP21912 280 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 ATICP31939 592 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 KRT85P78386 507 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 FAM160A1Q05DH4 1040 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 CYP24A1Q07973 514 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 PSMD2Q13200 908 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 CCINQ13939 588 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 PDGFRLQ15198 375 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 DDR2Q16832 855 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 KNOP1Q1ED39 458 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 KBTBD7Q8WVZ9 684 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 USP13Q92995 863 aaPredicted RBP14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 ZFYVE19Q96K21 471 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 MMS19Q96T76 1030 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 NCDNQ9UBB6 729 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 USP25Q9UHP3 1055 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 RAB23Q9ULC3 237 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 SMG5Q9UPR3 1016 aaKnown RBP14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 PTPRJQ12913 1337 aa14.06□□□□□ -0.16
SYNGAP1-224ENST00000637721 TRAV19A0A0A6YYK7 116 aa14.05□□□□□ -0.16
SYNGAP1-224ENST00000637721 TRIM66O15016 1216 aa14.05□□□□□ -0.16
SYNGAP1-224ENST00000637721 USP17L7P0C7H9 530 aa14.05□□□□□ -0.16
SYNGAP1-224ENST00000637721 SLFN14P0C7P3 912 aa14.05□□□□□ -0.16
SYNGAP1-224ENST00000637721 TCF3P15923 654 aa14.05□□□□□ -0.16
SYNGAP1-224ENST00000637721 ANXA13P27216 316 aa14.05□□□□□ -0.16
SYNGAP1-224ENST00000637721 HOXA6P31267 233 aa14.05□□□□□ -0.16
SYNGAP1-224ENST00000637721 SOX9P48436 509 aa14.05□□□□□ -0.16
SYNGAP1-224ENST00000637721 PPP3CCP48454 512 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms