RNA–Protein interactions for RNA: ENST00000637628.1

CHRNA4-220, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 5

Gene CHRNA4, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-220ENST00000637628 GPAT2Q6NUI2 795 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 LIAT1Q6ZQX7 453 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 GADL1Q6ZQY3 521 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 FAM83HQ6ZRV2 1179 aaPredicted RBP3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 RAB11FIP2Q7L804 512 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 CHST3Q7LGC8 479 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 ANKS1BQ7Z6G8 1248 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 RSPH3Q86UC2 560 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 TUSC5Q8IXB3 177 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 NLGN4XQ8N0W4 816 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 CNTROBQ8N137 903 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 LZTR1Q8N653 840 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 IL22RA1Q8N6P7 574 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 GOLGA6L1Q8N7Z2 621 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 FRMD1Q8N878 549 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 USP38Q8NB14 1042 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 POGLUT1Q8NBL1 392 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 DENND6BQ8NEG7 585 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 CHST13Q8NET6 341 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 SPATA20Q8TB22 786 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 SETD6Q8TBK2 473 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 CPT1CQ8TCG5 803 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 FAM216AQ8WUB2 273 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 BCL7CQ8WUZ0 217 aaPredicted RBP3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 KBTBD7Q8WVZ9 684 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 SEPT1Q8WYJ6 367 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 TRIM43Q96BQ3 446 aaPredicted RBP3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 ABHD17AQ96GS6 310 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 SAMD11Q96NU1 681 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 FCRL3Q96P31 734 aaPredicted RBP3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 PRAM1Q96QH2 718 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 MIPEPQ99797 713 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 LPIN3Q9BQK8 851 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 TEX12Q9BXU0 123 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 TRIM54Q9BYV2 358 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 KLHL4Q9C0H6 718 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 TWSG1Q9GZX9 223 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 NUCKS1Q9H1E3 243 aaKnown RBP3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 ATXN3LQ9H3M9 355 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 WDCPQ9H6R7 721 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 GREM2Q9H772 168 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 PIDD1Q9HB75 910 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 BTG4Q9NY30 223 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 AIPL1Q9NZN9 384 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 CRIM1Q9NZV1 1036 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 SELENONQ9NZV5 590 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 DNAJB9Q9UBS3 223 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 SUN2Q9UH99 717 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 PRSS50Q9UI38 385 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 USP18Q9UMW8 372 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 SLC6A14Q9UN76 642 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 AP4E1Q9UPM8 1137 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 TIMM13Q9Y5L4 95 aaPredicted RBP3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 MYPNQ86TC9 1320 aa3.68□□□□□ -1.82
CHRNA4-220ENST00000637628 COL17A1Q9UMD9 1497 aaPredicted RBP3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 ARPC4-TTLL3A0A0A6YYG9 625 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 LINC00854A0A1B0GVQ3 168 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 ARHGEF37A1IGU5 675 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 VWA3AA6NCI4 1184 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 PRAMEF25A6NGN4 478 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 STX16-NPEPL1H3BU86 382 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 BTN3A1O00481 513 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 STX16O14662 325 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 HNRNPRO43390 633 aaKnown RBP3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 BNIP3LO60238 219 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 CEP104O60308 925 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 BUB1BO60566 1050 aaPredicted RBP3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 PHF2O75151 1096 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 SIN3BO75182 1162 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 LRRN2O75325 713 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 RASSF9O75901 435 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 LRIG2O94898 1065 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 CSPG5O95196 566 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 PCDH8O95206 1070 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 IFNB1P01574 187 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 OPN1MWP04001 364 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 GSTM1P09488 218 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 HMOX1P09601 288 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 OPN1MW2P0DN77 364 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 OPN1MW3P0DN78 364 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 MYBL1P10243 752 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 PDHBP11177 359 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 GZMAP12544 262 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 FDPSP14324 419 aaKnown RBP3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 SYN1P17600 705 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 PTPN2P17706 415 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 CCNCP24863 283 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 EPHA8P29322 1005 aaPredicted RBP3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 CIITAP33076 1130 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 IFNAR2P48551 515 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 GALK1P51570 392 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 RBM5P52756 815 aaKnown RBP eCLIP3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 ARFIP2P53365 341 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 ARFIP1P53367 373 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 HDAC4P56524 1084 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 DEUP1Q05D60 604 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 RALGDSQ12967 914 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 SGCGQ13326 291 aa3.67□□□□□ -1.82
CHRNA4-220ENST00000637628 TDGQ13569 410 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms