RNA–Protein interactions for RNA: ENST00000636966.1

CACNA1A-232, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 3,938 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-232ENST00000636966 ITGA4P13612 1032 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 SSTR3P32745 418 aaPredicted RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 HPDP32754 393 aaPredicted RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 CTNNA1P35221 906 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 NSFP46459 744 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 POU5F1Q01860 360 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 PPARDQ03181 441 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 TRPC3Q13507 836 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 PPP1R7Q15435 360 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 LIN9Q5TKA1 542 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 SCARA5Q6ZMJ2 495 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 TMEM173Q86WV6 379 aaPredicted RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 SHC3Q92529 594 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 FAM53CQ9NYF3 392 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 CXXC1Q9P0U4 656 aaPredicted RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 AGAP1Q9UPQ3 857 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 PCDHB4Q9Y5E5 795 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 A0A0A6YYK5 440 aaPredicted RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 CASTOR2A6NHX0 329 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 RTN2O75298 545 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 TMEM191BP0C7N4 346 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 BPIFB4P59827 614 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 WDR72Q3MJ13 1102 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 PAN2Q504Q3 1202 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 FAM71AQ8IYT1 594 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 DDX1Q92499 740 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 RNPC3Q96LT9 517 aaKnown RBP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 CASD1Q96PB1 797 aa8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.7□□□□□ -1.02
CACNA1A-232ENST00000636966 TDRD15B5MCY1 1934 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 FNDC1Q4ZHG4 1894 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 A0A0C4DFX4 3053 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 MIF4GDA9UHW6 222 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 HAX1O00165 279 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 ATMINO43313 823 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 ACTN2P35609 894 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 ATP1A2P50993 1020 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 CUL1Q13616 776 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 UPP1Q16831 310 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 EGFL6Q8IUX8 553 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 BADQ92934 168 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 NUP85Q9BW27 656 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 RSAD1Q9HA92 442 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 TAS2R14Q9NYV8 317 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 CNOT8Q9UFF9 292 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 MTRF1LQ9UGC7 380 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 USTQ9Y2C2 406 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 INPP5FQ9Y2H2 1132 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 ALG6Q9Y672 507 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 MYH10P35580 1976 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 TLDC2A0PJX2 215 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 I3L4J1 428 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 INPPL1O15357 1258 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 TLR3O15455 904 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 MYZAPP0CAP1 466 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 CHRNB2P17787 502 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 CUL2Q13617 745 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 NOP9Q86U38 636 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 CCDC25Q86WR0 208 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 SLC30A5Q8TAD4 765 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 ZNF564Q8TBZ8 553 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 HASPINQ8TF76 798 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 KBTBD7Q8WVZ9 684 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 BCO2Q9BYV7 579 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 FAM107BQ9H098 131 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 NXF1Q9UBU9 619 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 NOCTQ9UK39 431 aaKnown RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 SMIM23A6NLE4 172 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 BTNL10A8MVZ5 291 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 MYO1FO00160 1098 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 LILRA4P59901 499 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 DR1Q01658 176 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 GCNT1Q02742 428 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 CALCOCO2Q13137 446 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 SOWAHAQ2M3V2 549 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 ZNF394Q53GI3 561 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 KIAA0319Q5VV43 1072 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 MFSD5Q6N075 450 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 DDX42Q86XP3 938 aaKnown RBP eCLIP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 BCL7CQ8WUZ0 217 aaPredicted RBP8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 HPDLQ96IR7 371 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 ANKRD36BP1Q96IX9 119 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 FAM81BQ96LP2 452 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 FAM114A2Q9NRY5 505 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 NENFQ9UMX5 172 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 GIT1Q9Y2X7 761 aa8.69□□□□□ -1.02
CACNA1A-232ENST00000636966 DAPK3O43293 454 aa8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 CD58P19256 250 aa8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 YARSP54577 528 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 HNRNPH2P55795 449 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 MTMR3Q13615 1198 aa8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 TTC19Q6DKK2 380 aaPredicted RBP8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 OTOP2Q7RTS6 562 aa8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 LIMS2Q7Z4I7 341 aa8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 SPRED2Q7Z698 418 aa8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 ACTRT1Q8TDG2 376 aa8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 AENQ8WTP8 325 aaKnown RBP8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 CASKIN2Q8WXE0 1202 aa8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 ARHGEF26Q96DR7 871 aa8.68□□□□□ -1.02
CACNA1A-232ENST00000636966 ABHD8Q96I13 439 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms