RNA–Protein interactions for RNA: ENST00000636214.1

PNKP-225, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 805 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-225ENST00000636214 MTAPQ13126 283 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 CUL4BQ13620 913 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 PSMD6Q15008 389 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 KNOP1Q1ED39 458 aaKnown RBP19.19■□□□□ 0.66
PNKP-225ENST00000636214 CFAP221Q4G0U5 840 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 SDHAF4Q5VUM1 108 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 CC2D1AQ6P1N0 951 aaPredicted RBP19.19■□□□□ 0.66
PNKP-225ENST00000636214 MAML2Q8IZL2 1156 aaPredicted RBP19.19■□□□□ 0.66
PNKP-225ENST00000636214 FSIP1Q8NA03 581 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 CCDC47Q96A33 483 aaKnown RBP19.19■□□□□ 0.66
PNKP-225ENST00000636214 SPATA32Q96LK8 384 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 MAGEC2Q9UBF1 373 aaPredicted RBP19.19■□□□□ 0.66
PNKP-225ENST00000636214 SERTAD1Q9UHV2 236 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 RCOR1Q9UKL0 485 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 ATP6V1DQ9Y5K8 247 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 DENND4CQ5VZ89 1909 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 PTPRJQ12913 1337 aa19.19■□□□□ 0.66
PNKP-225ENST00000636214 COL4A2P08572 1712 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 SOBPA7XYQ1 873 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 ARNTLO00327 626 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 GABRDO14764 452 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 NRLP54845 237 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 PSMC1P62191 440 aaKnown RBP19.18■□□□□ 0.66
PNKP-225ENST00000636214 EHHADHQ08426 723 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 BMT2Q1RMZ1 405 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 RALGPS2Q86X27 583 aaPredicted RBP19.18■□□□□ 0.66
PNKP-225ENST00000636214 GRAMD1CQ8IYS0 662 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 TTC8Q8TAM2 541 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 SECISBP2LQ93073 1101 aaKnown RBP19.18■□□□□ 0.66
PNKP-225ENST00000636214 ZFYVE19Q96K21 471 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 SLC46A2Q9BY10 475 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 FAM126AQ9BYI3 521 aaPredicted RBP19.18■□□□□ 0.66
PNKP-225ENST00000636214 SMG9Q9H0W8 520 aaKnown RBP19.18■□□□□ 0.66
PNKP-225ENST00000636214 TRPC7Q9HCX4 862 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 PRMT8Q9NR22 394 aaPredicted RBP19.18■□□□□ 0.66
PNKP-225ENST00000636214 USP25Q9UHP3 1055 aa19.18■□□□□ 0.66
PNKP-225ENST00000636214 OTOGLQ3ZCN5 2332 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 SPECC1L-ADORA2AF8WAN1 911 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 F11P03951 625 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 PDGFRBP09619 1106 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 HMGA1P17096 107 aaKnown RBP19.17■□□□□ 0.66
PNKP-225ENST00000636214 WARSP23381 471 aaKnown RBP19.17■□□□□ 0.66
PNKP-225ENST00000636214 CTHP32929 405 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 MAGEA11P43364 429 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 SOX9P48436 509 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 CYP27A1Q02318 531 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 BIRC3Q13489 604 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 ITPRIPL2Q3MIP1 535 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 TXNDC8Q6A555 127 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 C12orf56Q8IXR9 622 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 STKLD1Q8NE28 680 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 OR6B3Q8NGW1 331 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 GTSE1Q9NYZ3 720 aa19.17■□□□□ 0.66
PNKP-225ENST00000636214 MYBPHLA2RUH7 354 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 SHISA7A6NL88 538 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 NOL4O94818 638 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 KIF20AO95235 890 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 MYL1P05976 194 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 PFKFB1P16118 471 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 GNL1P36915 607 aaPredicted RBP19.16■□□□□ 0.66
PNKP-225ENST00000636214 GRIK1P39086 918 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 AMPD2Q01433 879 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 PSMD2Q13200 908 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 FZD5Q13467 585 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 WDR72Q3MJ13 1102 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 DGKKQ5KSL6 1271 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 VSTM1Q6UX27 236 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 MON1AQ86VX9 555 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 KBTBD7Q8WVZ9 684 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 RUBCNQ92622 972 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 MYLPFQ96A32 169 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 SYAP1Q96A49 352 aaPredicted RBP19.16■□□□□ 0.66
PNKP-225ENST00000636214 TRMT2BQ96GJ1 504 aaKnown RBP19.16■□□□□ 0.66
PNKP-225ENST00000636214 PAGE5Q96GU1 130 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 TDP1Q9NUW8 608 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 EHD2Q9NZN4 543 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 NCDNQ9UBB6 729 aa19.16■□□□□ 0.66
PNKP-225ENST00000636214 TRAV19A0A0A6YYK7 116 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 A0A1B0GVL5 298 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 TRIM66O15016 1216 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 HCRTO43612 131 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 CKMP06732 381 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 CMA1P23946 247 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 CXCL12P48061 93 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 PDE6CP51160 858 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 AP3M2P53677 418 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 SCARA3Q6AZY7 606 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 FAM171BQ6P995 826 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 TSSK4Q6SA08 328 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 TTC16Q8NEE8 873 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 EXOC4Q96A65 974 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 LRRC3BQ96PB8 259 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 PKMYT1Q99640 499 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 GKN1Q9NS71 199 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 RAB23Q9ULC3 237 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 GTF3C3Q9Y5Q9 886 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 ZNF292O60281 2723 aa19.15■□□□□ 0.66
PNKP-225ENST00000636214 GPR179Q6PRD1 2367 aa19.14■□□□□ 0.66
PNKP-225ENST00000636214 OBSL1O75147 1896 aa19.14■□□□□ 0.65
PNKP-225ENST00000636214 ACTN4O43707 911 aaKnown RBP19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms