RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 RPL10AP62906 217 aaKnown RBP16.48■□□□□ 0.23
CLN6-211ENST00000635754 ORC1Q13415 861 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 NCAPHQ15003 741 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 EXOC3L4Q17RC7 722 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 MIIPQ5JXC2 388 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 ITIH5Q86UX2 942 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 FAM200AQ8TCP9 573 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 CORO1BQ9BR76 489 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 CRACR2AQ9BSW2 395 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 HCFC1R1Q9NWW0 138 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 TAB2Q9NYJ8 693 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 CEP72Q9P209 647 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 DNMT3BQ9UBC3 853 aaKnown RBP16.48■□□□□ 0.23
CLN6-211ENST00000635754 NR2E1Q9Y466 385 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 ASB3Q9Y575 518 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 ATP8B3O60423 1300 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 DOCK6Q96HP0 2047 aa16.48■□□□□ 0.23
CLN6-211ENST00000635754 BECN2A8MW95 431 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 RHOP08100 348 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 ATF6P18850 670 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 CDK11BP21127 795 aaKnown RBP16.47■□□□□ 0.23
CLN6-211ENST00000635754 BDNFP23560 247 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 GCNT1Q02742 428 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 ZP2Q05996 745 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 KRT31Q15323 416 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 TAF12Q16514 161 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 TRIM65Q6PJ69 517 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 VSTM1Q6UX27 236 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 CRYBG2Q8N1P7 616 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 LEMD2Q8NC56 503 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 RPGRIP1Q96KN7 1286 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 TWNKQ96RR1 684 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 UHRF1Q96T88 793 aaPredicted RBP16.47■□□□□ 0.23
CLN6-211ENST00000635754 LPIN3Q9BQK8 851 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 MED10Q9BTT4 135 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 ELOVL4Q9GZR5 314 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 ASAH2Q9NR71 780 aa16.47■□□□□ 0.23
CLN6-211ENST00000635754 CAVIN2O95810 425 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 ZNF18P17022 549 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 SP100P23497 879 aaPredicted RBP16.46■□□□□ 0.23
CLN6-211ENST00000635754 FSHRP23945 695 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 NTHL1P78549 312 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 ZNF394Q53GI3 561 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 OTOP3Q7RTS5 596 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 ARHGEF19Q8IW93 802 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 SCN4BQ8IWT1 228 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 DHX40Q8IX18 779 aaKnown RBP16.46■□□□□ 0.23
CLN6-211ENST00000635754 WHAMMQ8TF30 809 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 PSMG2Q969U7 264 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 B3GNT5Q9BYG0 378 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 VPS16Q9H269 839 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 USTQ9Y2C2 406 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 MYH10P35580 1976 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 NOTCH4Q99466 2003 aa16.46■□□□□ 0.23
CLN6-211ENST00000635754 TRIM66O15016 1216 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 ANXA13P27216 316 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 GRIK1P39086 918 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 DDR2Q16832 855 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 CYP4A22Q5TCH4 519 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 PHLDB3Q6NSJ2 640 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 PDZD4Q76G19 769 aaPredicted RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 RRAGAQ7L523 313 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 GET4Q7L5D6 327 aaPredicted RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 FAM35AQ86V20 835 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 TDRD5Q8NAT2 981 aaKnown RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 GIPC2Q8TF65 315 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 ACSF2Q96CM8 615 aaPredicted RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 SMARCD1Q96GM5 515 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 TMEM176AQ96HP8 235 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 FAM81BQ96LP2 452 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 NECAB3Q96P71 396 aaPredicted RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 ZNF518BQ9C0D4 1074 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 AVENQ9NQS1 362 aaPredicted RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 FAM49BQ9NUQ9 324 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 APEX2Q9UBZ4 518 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 LIMA1Q9UHB6 759 aaKnown RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 CLDN5O00501 218 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 ZNF197O14709 1029 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 CSH1P0DML2 217 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 CSH2P0DML3 217 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 MYL4P12829 197 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 CCDC130P13994 396 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 SLC9A1P19634 815 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 PON1P27169 355 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 GBP2P32456 591 aaPredicted RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 SSTR3P32745 418 aaPredicted RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 GPR15P49685 360 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 RAD23BP54727 409 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 EPHA5P54756 1037 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 TPM4P67936 248 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 FKBP15Q5T1M5 1219 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 ENOSF1Q7L5Y1 443 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 DNAJB7Q7Z6W7 309 aaPredicted RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 UBR7Q8N806 425 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 C12orf29Q8N999 325 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 SLC4A11Q8NBS3 891 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 SLC2A14Q8TDB8 520 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 GPR152Q8TDT2 470 aa16.45■□□□□ 0.22
CLN6-211ENST00000635754 HEXIM2Q96MH2 286 aaKnown RBP16.45■□□□□ 0.22
CLN6-211ENST00000635754 HSD3B7Q9H2F3 369 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms