RNA–Protein interactions for RNA: ENST00000635750.1

SCN1A-209, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SCN1A, Length 8,299 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-209ENST00000635750 RAB6BQ9NRW1 208 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ARL2BPQ9Y2Y0 163 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF711Q9Y462 761 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 RGS12O14924 1447 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ANKARQ7Z5J8 1434 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SYNMO15061 1565 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 EMSYQ7Z589 1322 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PTPN7P35236 360 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 RFC5P40937 340 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 GTF2A2P52657 109 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PPP2R2AP63151 447 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PURAQ00577 322 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CCNG2Q16589 344 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PGS1Q32NB8 556 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 DSG4Q86SJ6 1040 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 GRAMD1CQ8IYS0 662 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 TFB1MQ8WVM0 346 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CRELD1Q96HD1 420 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 KCNK16Q96T55 309 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 THUMPD3Q9BV44 507 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PACSIN1Q9BY11 444 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 C10orf88Q9H8K7 445 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 FANCEQ9HB96 536 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MSRAQ9UJ68 235 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MTMR6Q9Y217 621 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SH3GLB1Q9Y371 365 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 NCAPD2Q15021 1401 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 INSRP06213 1382 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ZFYVE16Q7Z3T8 1539 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 HSPA9P38646 679 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 HALP42357 657 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ARHGDIBP52566 201 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 HMGCS2P54868 508 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 RPL10AP62906 217 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CSNK2BP67870 215 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ATP2C1P98194 919 aaPredicted RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PEX6Q13608 980 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 NCAPHQ15003 741 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SF3B3Q15393 1217 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MRNIPQ6NTE8 343 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 FBXO42Q6P3S6 717 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MICU2Q8IYU8 434 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 MYO1HQ8N1T3 1032 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 BHMTQ93088 406 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 TBCDQ9BTW9 1192 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 TEX13BQ9BXU2 312 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 ZCCHC2Q9C0B9 1178 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CLPBQ9H078 707 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 PPCSQ9HAB8 311 aa5.77□□□□□ -1.49
SCN1A-209ENST00000635750 SAMSN1Q9NSI8 373 aaKnown RBP5.77□□□□□ -1.49
SCN1A-209ENST00000635750 CARNS1A5YM72 827 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 USP1O94782 785 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 SCP2P22307 547 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CDC25AP30304 524 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 HUNKP57058 714 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF200P98182 395 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ITGA9Q13797 1035 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CBFBQ13951 182 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 NDUFAF6Q330K2 333 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 SRBD1Q8N5C6 995 aaKnown RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ATL2Q8NHH9 583 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 GMCL1Q96IK5 515 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 TRPC4Q9UBN4 977 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PAIP2BQ9ULR5 123 aaKnown RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 TNFSF13BQ9Y275 285 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 SNX8Q9Y5X2 465 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 KDM6AO15550 1401 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 AP3D1O14617 1153 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PDGFRAP16234 1089 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 IFNGR2P38484 337 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 LIFRP42702 1097 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 NCOA4Q13772 614 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 TCEA2Q15560 299 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 XKR3Q5GH77 459 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PMF1Q6P1K2 205 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CCDC81Q6ZN84 652 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 FRMD5Q7Z6J6 570 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 IFNEQ86WN2 208 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 UNC45BQ8IWX7 931 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 SIX5Q8N196 739 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PCSK9Q8NBP7 692 aaKnown RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 ZNF248Q8NDW4 579 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 FBXO32Q969P5 355 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 RNFT2Q96EX2 444 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 CCDC177Q9NQR7 707 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 SMG5Q9UPR3 1016 aaKnown RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 GMNCA6NCL1 334 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 TM9SF1O15321 606 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 DGAT1O75907 488 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 FGFR1P11362 822 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 MSH3P20585 1137 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 FGFR2P21802 821 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 GARTP22102 1010 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 RGS7P49802 495 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 PLOD1Q02809 727 aaPredicted RBP5.76□□□□□ -1.49
SCN1A-209ENST00000635750 NFIL3Q16649 462 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 FAM182BQ5T319 152 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 LRRC74BQ6ZQY2 392 aa5.76□□□□□ -1.49
SCN1A-209ENST00000635750 RFX8Q6ZV50 586 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms