RNA–Protein interactions for RNA: ENST00000631057.2

GPC3-204, Transcript of glypican 3, humanhuman

TSL 1 (best) BASIC

Gene GPC3, Length 1,581 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-204ENST00000631057 SLC24A2Q9UI40 661 aa8.49□□□□□ -1.05
GPC3-204ENST00000631057 AGTPBP1Q9UPW5 1226 aa8.49□□□□□ -1.05
GPC3-204ENST00000631057 CSADQ9Y600 493 aa8.49□□□□□ -1.05
GPC3-204ENST00000631057 UNCXA6NJT0 531 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 VGLL3A8MV65 326 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SGK1O00141 431 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SMAPO00193 183 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 ALOX15BO15296 676 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PRPF4O43172 522 aaKnown RBP eCLIP8.48□□□□□ -1.059e-8■■□□□ 12.7
GPC3-204ENST00000631057 SLC25A27O95847 323 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 CETPP11597 493 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 KRT3P12035 628 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 CD19P15391 556 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PECAM1P16284 738 aaPredicted RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 MARK3P27448 753 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SLC26A2P50443 739 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SLC18A1P54219 525 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PLCB3Q01970 1234 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 MPP2Q14168 576 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 RASA2Q15283 850 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 CCDC142Q17RM4 750 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 LY6KQ17RY6 165 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 ZNF394Q53GI3 561 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 ZNF667Q5HYK9 610 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 CELF3Q5SZQ8 465 aaKnown RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 RNASEH2BQ5TBB1 312 aaKnown RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 CYP4A22Q5TCH4 519 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 DENND1BQ6P3S1 775 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 GADL1Q6ZQY3 521 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 BBS12Q6ZW61 710 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 TRABD2AQ86V40 505 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 THNSL1Q8IYQ7 743 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 LRRC71Q8N4P6 559 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 WDTC1Q8N5D0 677 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 CCDC63Q8NA47 563 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SLC35B2Q8TB61 432 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 MAGEC3Q8TD91 643 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 BCO2Q9BYV7 579 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 FZD8Q9H461 694 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 VPS37BQ9H9H4 285 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 RPF1Q9H9Y2 349 aaKnown RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 PTPRHQ9HD43 1115 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 ABCF3Q9NUQ8 709 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SMG5Q9UPR3 1016 aaKnown RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 DYNC1LI1Q9Y6G9 523 aaKnown RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 SBF1O95248 1867 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 RALGAPA2Q2PPJ7 1873 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 RBM47A0AV96 593 aaKnown RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 C3orf70A6NLC5 250 aaPredicted RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 ZBTB42B2RXF5 422 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 GOLGA8SH3BPF8 625 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 INO80B-WBP1J3KQ70 363 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 MGRN1O60291 552 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 GH1P01241 217 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 ZSCAN5DPP0CG00 497 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 ETS1P14921 441 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SLC8A1P32418 973 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PHBP35232 272 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 ARL4CP56559 192 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PSMC1P62191 440 aaKnown RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 SLC25A11Q02978 314 aaKnown RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 TNFAIP2Q03169 654 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PRKG1Q13976 671 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SPARCL1Q14515 664 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 ZNF268Q14587 947 aaPredicted RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 ACAP1Q15027 740 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 MTFR1Q15390 333 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 TAZQ16635 292 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 HIF1AQ16665 826 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PTPN20Q4JDL3 420 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 RNF43Q68DV7 783 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SCARA3Q6AZY7 606 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 TXNRD3NBQ6F5E7 133 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PRUNE1Q86TP1 453 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 RHPN2Q8IUC4 686 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PPIL6Q8IXY8 311 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 GPC2Q8N158 579 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 GLIS1Q8NBF1 620 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PRCCQ92733 491 aaPredicted RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 SMC6Q96SB8 1091 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 INO80BQ9C086 356 aaPredicted RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 TRABDQ9H4I3 376 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SMARCAD1Q9H4L7 1026 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 SYNCQ9H7C4 482 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 VRTNQ9H8Y1 702 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 CYP3A43Q9HB55 503 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 MLXIPLQ9NP71 852 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 IGSF5Q9NSI5 407 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 PSMC3IPQ9P2W1 217 aaPredicted RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 NXF1Q9UBU9 619 aaKnown RBP8.48□□□□□ -1.05
GPC3-204ENST00000631057 PRKAG3Q9UGI9 489 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 FETUBQ9UGM5 382 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 POLIQ9UNA4 740 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 TNFSF13BQ9Y275 285 aa8.48□□□□□ -1.05
GPC3-204ENST00000631057 LOC102724159A0A0B4J2E5 919 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 A0A0G2JLL6 359 aaPredicted RBP8.47□□□□□ -1.05
GPC3-204ENST00000631057 POC1B-GALNT4F8VUJ3 575 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 MAGEB2O15479 319 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 HBP1O60381 514 aa8.47□□□□□ -1.05
GPC3-204ENST00000631057 CST8O60676 142 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms