RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 OR4Q2P0C623 313 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 SPATA31D3P0C874 917 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 BMP1P13497 986 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 ZNF18P17022 549 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 PTPN2P17706 415 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 PTPN1P18031 435 aaKnown RBP8.56□□□□□ -1.04
CHD2-213ENST00000628118 CDK11BP21127 795 aaKnown RBP8.56□□□□□ -1.04
CHD2-213ENST00000628118 RFX1P22670 979 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 LMO2P25791 158 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 TFF2Q03403 129 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 TWF1Q12792 350 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 DUSP4Q13115 394 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 CUL2Q13617 745 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 NCAPHQ15003 741 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 MGAT5BQ3V5L5 792 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 FKBP15Q5T1M5 1219 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 CYP4A22Q5TCH4 519 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 SCARA5Q6ZMJ2 495 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 SPATA31D4Q6ZUB0 917 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 LRRTM3Q86VH5 581 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 ADHFE1Q8IWW8 467 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 ATAD1Q8NBU5 361 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 LMO3Q8TAP4 145 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 MYLPFQ96A32 169 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 PGLYRP2Q96PD5 576 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 TMEM209Q96SK2 561 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 INTS2Q9H0H0 1204 aaKnown RBP8.56□□□□□ -1.04
CHD2-213ENST00000628118 SDCBP2Q9H190 292 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 CISHQ9NSE2 258 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 FANCLQ9NW38 375 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 ABI2Q9NYB9 513 aaPredicted RBP8.56□□□□□ -1.04
CHD2-213ENST00000628118 GCNT4Q9P109 453 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 UXTQ9UBK9 157 aaPredicted RBP8.56□□□□□ -1.04
CHD2-213ENST00000628118 LIMA1Q9UHB6 759 aaKnown RBP8.56□□□□□ -1.04
CHD2-213ENST00000628118 GTF3C4Q9UKN8 822 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 KIAA1257Q9ULG3 409 aa8.56□□□□□ -1.04
CHD2-213ENST00000628118 CLUHO75153 1309 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 SOBPA7XYQ1 873 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 CCL16O15467 120 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 VNN2O95498 520 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 PAEPP09466 180 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 PDGFRBP09619 1106 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 WEE2P0C1S8 567 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 CSH1P0DML2 217 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 CSH2P0DML3 217 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 IL9P15248 144 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 ACAT1P24752 427 aaKnown RBP8.55□□□□□ -1.04
CHD2-213ENST00000628118 ANXA13P27216 316 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 NDST1P52848 882 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 EPHA5P54756 1037 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 MFAP3P55082 362 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 CDH8P55286 799 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 STILQ15468 1287 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 CLUL1Q15846 466 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 ARSIQ5FYB1 569 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 MIIPQ5JXC2 388 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 TRIM65Q6PJ69 517 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 OTOP3Q7RTS5 596 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 PPM1KQ8N3J5 372 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 C12orf76Q8N812 135 aaPredicted RBP8.55□□□□□ -1.04
CHD2-213ENST00000628118 TATDN2Q93075 761 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 PSMG2Q969U7 264 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 ACSF2Q96CM8 615 aaPredicted RBP8.55□□□□□ -1.04
CHD2-213ENST00000628118 SMARCD1Q96GM5 515 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 PCED1BQ96HM7 432 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 SPATA17Q96L03 361 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 C8orf48Q96LL4 319 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 SEPT5Q99719 369 aaPredicted RBP8.55□□□□□ -1.04
CHD2-213ENST00000628118 GPR88Q9GZN0 384 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 CRTAC1Q9NQ79 661 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 ASAH2Q9NR71 780 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 COMMD8Q9NX08 183 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP8.55□□□□□ -1.04
CHD2-213ENST00000628118 APEX2Q9UBZ4 518 aa8.55□□□□□ -1.04
CHD2-213ENST00000628118 PTPRDP23468 1912 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 COL6A3P12111 3177 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 C2orf16Q68DN1 1984 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 GOLGA6L19H0YKK7 550 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 RHOP08100 348 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 PFKLP17858 780 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 FSHRP23945 695 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 PON1P27169 355 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 CDC25CP30307 473 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 RAP1GAPP47736 663 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 PPP3CCP48454 512 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 KCNQ1P51787 676 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 PSMC1P62191 440 aaKnown RBP8.54□□□□□ -1.04
CHD2-213ENST00000628118 CYP27A1Q02318 531 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 IQCB1Q15051 598 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 KRT31Q15323 416 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 TAF12Q16514 161 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 FILIP1LQ4L180 1135 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 PABPC1LQ4VXU2 614 aaKnown RBP8.54□□□□□ -1.04
CHD2-213ENST00000628118 MDH1BQ5I0G3 518 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 ARHGAP17Q68EM7 881 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 LRSAM1Q6UWE0 723 aa8.54□□□□□ -1.04
CHD2-213ENST00000628118 PDZD4Q76G19 769 aaPredicted RBP8.54□□□□□ -1.04
CHD2-213ENST00000628118 DNAJB7Q7Z6W7 309 aaPredicted RBP8.54□□□□□ -1.04
CHD2-213ENST00000628118 DHX40Q8IX18 779 aaKnown RBP8.54□□□□□ -1.04
CHD2-213ENST00000628118 ZDHHC14Q8IZN3 488 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms