RNA–Protein interactions for RNA: ENST00000627738.1

SOX2-OT-244, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 692 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-244ENST00000627738 C11orf70Q9BRQ4 267 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 SNX25Q9H3E2 840 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 ELAC1Q9H777 363 aaKnown RBP10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 L2HGDHQ9H9P8 463 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 TMEM161AQ9NX61 479 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 CTTNBP2NLQ9P2B4 639 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 CNOT8Q9UFF9 292 aaKnown RBP10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 CHORDC1Q9UHD1 332 aaPredicted RBP10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 GTF3C4Q9UKN8 822 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 TBX21Q9UL17 535 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 COG5Q9UP83 839 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 JRKLQ9Y4A0 524 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 PCDHB7Q9Y5E2 793 aa10.54□□□□□ -0.72
SOX2-OT-244ENST00000627738 TANC1Q9C0D5 1861 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 O00370 1275 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 NCK2O43639 380 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 MICAL2O94851 1124 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 FTCDO95954 541 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 CYP1A2P05177 515 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 PDGFRBP09619 1106 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 MYBL1P10243 752 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 WARSP23381 471 aaKnown RBP10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 LMO2P25791 158 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 CDH5P33151 784 aaPredicted RBP10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 GNL1P36915 607 aaPredicted RBP10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 AMPD2Q01433 879 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 TCEAL1Q15170 157 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 C2CD6Q53TS8 623 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 NOMO2Q5JPE7 1267 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 PAPD7Q5XG87 772 aaKnown RBP10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 WSCD1Q658N2 575 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 PTCRAQ6ISU1 281 aaPredicted RBP10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 PPP1R2P3Q6NXS1 205 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 DSTYKQ6XUX3 929 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 MMS22LQ6ZRQ5 1243 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 FAM43BQ6ZT52 329 aaPredicted RBP10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 MON1BQ7L1V2 547 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 NECAB2Q7Z6G3 386 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 PHLDB2Q86SQ0 1253 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 ACOT1Q86TX2 421 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 ADGRF2Q8IZF7 708 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 PDCL2Q8N4E4 241 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 TMEM35BQ8NCS4 154 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 URGCPQ8TCY9 931 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 TRIM11Q96F44 468 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 UROC1Q96N76 676 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 LPIN3Q9BQK8 851 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 NUP85Q9BW27 656 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 ZNF518BQ9C0D4 1074 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 LHX5Q9H2C1 402 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 GOLPH3Q9H4A6 298 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 DPEP3Q9H4B8 488 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 ADAM22Q9P0K1 906 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 KIAA1257Q9ULG3 409 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 LRFN2Q9ULH4 789 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 CEP83Q9Y592 693 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 MRFAP1Q9Y605 127 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 SCN5AQ14524 2016 aa10.53□□□□□ -0.72
SOX2-OT-244ENST00000627738 TDRD15B5MCY1 1934 aaKnown RBP10.52□□□□□ -0.72
SOX2-OT-244ENST00000627738 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 ZBBXA8MT70 800 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 M0QYV0 167 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 BUB1BO60566 1050 aaPredicted RBP10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 B3GAT3O94766 335 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 MTA2O94776 668 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 DDHD2O94830 711 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 FAM163BP0C2L3 166 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 RRM1P23921 792 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 BRCC3P46736 316 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 GATMP50440 423 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 HADHBP55084 474 aaKnown RBP10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 PTP4A2Q12974 167 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 CNGA2Q16280 664 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 PTPROQ16827 1216 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 GOLGA7BQ2TAP0 167 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 PAN2Q504Q3 1202 aaKnown RBP10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 TIGD5Q53EQ6 642 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 PPP1R26Q5T8A7 1209 aaPredicted RBP10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 MEI1Q5TIA1 1274 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 LIN9Q5TKA1 542 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 LLGL2Q6P1M3 1020 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 LCLAT1Q6UWP7 414 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 CD300LGQ6UXG3 332 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 SLFN11Q7Z7L1 901 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 DAAM2Q86T65 1068 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 ZNF280BQ86YH2 543 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 C12orf29Q8N999 325 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 LRRC57Q8N9N7 239 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 UBA3Q8TBC4 463 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 ZNF564Q8TBZ8 553 aaPredicted RBP10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 VCPIP1Q96JH7 1222 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 AVENQ9NQS1 362 aaPredicted RBP10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 TBC1D13Q9NVG8 400 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 KANSL3Q9P2N6 904 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 UVRAGQ9P2Y5 699 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 CDC23Q9UJX2 597 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 TSPAN16Q9UKR8 245 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 STXBP5LQ9Y2K9 1186 aa10.52□□□□□ -0.73
SOX2-OT-244ENST00000627738 TIMM13Q9Y5L4 95 aaPredicted RBP10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms