RNA–Protein interactions for RNA: ENST00000625926.1

SSBP4-215, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5 BASIC

Gene SSBP4, Length 162 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-215ENST00000625926 SPATA6Q9NWH7 488 aaPredicted RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 THG1LQ9NWX6 298 aaKnown RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 MAGEC2Q9UBF1 373 aaPredicted RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 UXTQ9UBK9 157 aaPredicted RBP11.6□□□□□ -0.55
SSBP4-215ENST00000625926 C2orf16Q68DN1 1984 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 SLC38A8A6NNN8 435 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 ARNTLO00327 626 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 LAMTOR5O43504 91 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 CALUO43852 315 aaPredicted RBP11.59□□□□□ -0.55
SSBP4-215ENST00000625926 NOL4O94818 638 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 SP9P0CG40 484 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 DDX6P26196 483 aaKnown RBP eCLIP11.59□□□□□ -0.557e-7■■■■■ 27.5
SSBP4-215ENST00000625926 AVPR1AP37288 418 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 MAGEA11P43364 429 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 RPS9P46781 194 aaKnown RBP11.59□□□□□ -0.55
SSBP4-215ENST00000625926 MYL6P60660 151 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 PSMC1P62191 440 aaKnown RBP11.59□□□□□ -0.55
SSBP4-215ENST00000625926 CLDN10P78369 228 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 FZD5Q13467 585 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 BIRC3Q13489 604 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 CCDC142Q17RM4 750 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 C1orf228Q6PIY5 440 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 VSTM1Q6UX27 236 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 KRBA2Q6ZNG9 492 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 TMEM150AQ86TG1 271 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 SCN4BQ8IWT1 228 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 MAB21L3Q8N8X9 362 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 OR6B3Q8NGW1 331 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 MYCBPAPQ8TBZ2 947 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 BPIFB1Q8TDL5 484 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 PARD3BQ8TEW8 1205 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 MRPS31Q92665 395 aaKnown RBP11.59□□□□□ -0.55
SSBP4-215ENST00000625926 SYAP1Q96A49 352 aaPredicted RBP11.59□□□□□ -0.55
SSBP4-215ENST00000625926 TRMT2BQ96GJ1 504 aaKnown RBP11.59□□□□□ -0.55
SSBP4-215ENST00000625926 MSANTD3Q96H12 275 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 CCDC34Q96HJ3 373 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 MYRFLQ96LU7 910 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 MRPL45Q9BRJ2 306 aaKnown RBP11.59□□□□□ -0.55
SSBP4-215ENST00000625926 SEMA4AQ9H3S1 761 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 C8orf33Q9H7E9 229 aaPredicted RBP11.59□□□□□ -0.55
SSBP4-215ENST00000625926 CRTAC1Q9NQ79 661 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 NDRG2Q9UN36 371 aaKnown RBP11.59□□□□□ -0.55
SSBP4-215ENST00000625926 EPG5Q9HCE0 2579 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 NCANO14594 1321 aa11.59□□□□□ -0.55
SSBP4-215ENST00000625926 PRR23AA6NEV1 266 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 LRRIQ3A6PVS8 624 aaPredicted RBP11.58□□□□□ -0.56
SSBP4-215ENST00000625926 RHOBTB3O94955 611 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 ZNF202O95125 648 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 PRAMEF12O95522 483 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 C4BPAP04003 597 aaKnown RBP11.58□□□□□ -0.56
SSBP4-215ENST00000625926 NR3C1P04150 777 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 CCNE1P24864 410 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 GRIK1P39086 918 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 CASP4P49662 377 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 KPNA1P52294 538 aaPredicted RBP11.58□□□□□ -0.56
SSBP4-215ENST00000625926 PLCB2Q00722 1185 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 CYP27A1Q02318 531 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 DPYDQ12882 1025 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 TDRD10Q5VZ19 366 aaKnown RBP11.58□□□□□ -0.56
SSBP4-215ENST00000625926 TXNDC8Q6A555 127 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 ZC3H14Q6PJT7 736 aaKnown RBP11.58□□□□□ -0.56
SSBP4-215ENST00000625926 ASCL5Q7RTU5 278 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 MON1AQ86VX9 555 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 MAML2Q8IZL2 1156 aaPredicted RBP11.58□□□□□ -0.56
SSBP4-215ENST00000625926 ZNF687Q8N1G0 1237 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 STKLD1Q8NE28 680 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 PLEKHO2Q8TD55 490 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 MYLPFQ96A32 169 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 CEP295NLQ96MC4 621 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 SMG9Q9H0W8 520 aaKnown RBP11.58□□□□□ -0.56
SSBP4-215ENST00000625926 XYLT2Q9H1B5 865 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 VRTNQ9H8Y1 702 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 LMAN1LQ9HAT1 526 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 GDPD2Q9HCC8 539 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 NXF1Q9UBU9 619 aaKnown RBP11.58□□□□□ -0.56
SSBP4-215ENST00000625926 FBXO4Q9UKT5 387 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 TRAF3IP3Q9Y228 551 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 FRMD4BQ9Y2L6 1034 aa11.58□□□□□ -0.56
SSBP4-215ENST00000625926 KMT2BQ9UMN6 2715 aaPredicted RBP11.58□□□□□ -0.56
SSBP4-215ENST00000625926 A8MXQ7 604 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 IKBKBO14920 756 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 KRT37O76014 449 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 CLSTN1O94985 981 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 PTPN1P18031 435 aaKnown RBP11.57□□□□□ -0.56
SSBP4-215ENST00000625926 BDNFP23560 247 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 ANXA13P27216 316 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 NUCB2P80303 420 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 CSTF1Q05048 431 aaKnown RBP11.57□□□□□ -0.56
SSBP4-215ENST00000625926 NCOA4Q13772 614 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 KCNB1Q14721 858 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 SGSM1Q2NKQ1 1148 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 ZNF528Q3MIS6 628 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 MDH1BQ5I0G3 518 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 CEP135Q66GS9 1140 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 RALGPS2Q86X27 583 aaPredicted RBP11.57□□□□□ -0.56
SSBP4-215ENST00000625926 TTC8Q8TAM2 541 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 TMC2Q8TDI7 906 aa11.57□□□□□ -0.56
SSBP4-215ENST00000625926 USP13Q92995 863 aaPredicted RBP11.57□□□□□ -0.56
SSBP4-215ENST00000625926 PCED1BQ96HM7 432 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms