RNA–Protein interactions for RNA: ENST00000625423.2

VARS2-213, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2 BASIC

Gene VARS2, Length 3,362 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-213ENST00000625423 LVRNQ6Q4G3 990 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 KIAA0319LQ8IZA0 1049 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 PYROXD1Q8WU10 500 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 CPT1BQ92523 772 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 MRPL4Q9BYD3 311 aaKnown RBP11.84□□□□□ -0.51
VARS2-213ENST00000625423 RABGEF1Q9UJ41 708 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 RLFQ13129 1914 aa11.84□□□□□ -0.51
VARS2-213ENST00000625423 C19orf81C9J6K1 198 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 LRCH4O75427 683 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 FARP2O94887 1054 aaPredicted RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 KRT3P12035 628 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 CD19P15391 556 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 CCND1P24385 295 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 CDH5P33151 784 aaPredicted RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 OSTNP61366 133 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 SLC25A11Q02978 314 aaKnown RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 ZNF699Q32M78 642 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 RGS9BPQ6ZS82 235 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 RHPN2Q8IUC4 686 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 UTP4Q969X6 686 aaKnown RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 ZNF668Q96K58 619 aaPredicted RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 TMEM237Q96Q45 408 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 LRRC37BQ96QE4 947 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 ACO2Q99798 780 aaKnown RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 TXLNGQ9NUQ3 528 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 NXF1Q9UBU9 619 aaKnown RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 CYTH4Q9UIA0 394 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 PCDHGC3Q9UN70 934 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 PHIPQ8WWQ0 1821 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 OGTO15294 1046 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 MAFO75444 373 aaPredicted RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 CD48P09326 243 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 ASPAP45381 313 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 RAP1GAPP47736 663 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 HIRAP54198 1017 aaPredicted RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 LACTBP83111 547 aaPredicted RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 EFHC2Q5JST6 749 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 C3orf62Q6ZUJ4 267 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 PPIL6Q8IXY8 311 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 THNSL1Q8IYQ7 743 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 EMC1Q8N766 993 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 HOXC10Q9NYD6 342 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 NOP53Q9NZM5 478 aaKnown RBP11.83□□□□□ -0.52
VARS2-213ENST00000625423 HAO1Q9UJM8 370 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 POLIQ9UNA4 740 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 C15orf41Q9Y2V0 281 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 SNCAIPQ9Y6H5 919 aa11.83□□□□□ -0.52
VARS2-213ENST00000625423 TCRBV7S3A2A0A539 114 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 MARK3P27448 753 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 ARL4CP56559 192 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 GRM1Q13255 1194 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 ORC1Q13415 861 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 ILDR2Q71H61 639 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 POLNQ7Z5Q5 900 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 PCGF5Q86SE9 256 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 CDR2LQ86X02 465 aaPredicted RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 LRRC71Q8N4P6 559 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 RNF149Q8NC42 400 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 DNERQ8NFT8 737 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 ZNF75CPQ92670 426 aaPredicted RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 WDR83Q9BRX9 315 aaKnown RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 PCSK1NQ9UHG2 260 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 AFG3L2Q9Y4W6 797 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 WDR91A4D1P6 747 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 PRKCBP05771 671 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 KDELR1P24390 212 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 RPL22P35268 128 aaKnown RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 TCF7P36402 384 aaPredicted RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 EFNA5P52803 228 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 PSMC1P62191 440 aaKnown RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 ATP11AP98196 1134 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 EEPD1Q7L9B9 569 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 UNC45BQ8IWX7 931 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 TMEM130Q8N3G9 435 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 NAT8LQ8N9F0 302 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 FBXO36Q8NEA4 188 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 SLC16A10Q8TF71 515 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 RSAD2Q8WXG1 361 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 KLF6Q99612 283 aaPredicted RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 XYLT2Q9H1B5 865 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 C12orf65Q9H3J6 166 aaKnown RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 STRIP2Q9ULQ0 834 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 SIGLEC16A6NMB1 481 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 GOLGA8RI6L899 631 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 NDC80O14777 642 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 DIAPH2O60879 1101 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 HOXC6P09630 235 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 RPS12P25398 132 aaKnown RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 PHBP35232 272 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 CLNS1AP54105 237 aaKnown RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 LAMTOR4Q0VGL1 99 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 RASA2Q15283 850 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 BBS12Q6ZW61 710 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 OTOAQ7RTW8 1153 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 KIRREL3Q8IZU9 778 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 ATP11CQ8NB49 1132 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 C10orf82Q8WW14 230 aa11.82□□□□□ -0.52
VARS2-213ENST00000625423 RSRC1Q96IZ7 334 aaKnown RBP11.82□□□□□ -0.52
VARS2-213ENST00000625423 PAFAH2Q99487 392 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms