RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 ZNF33AQ06730 810 aa15.07■□□□□ 0
SNX1-214ENST00000625244 DMP1Q13316 513 aaPredicted RBP15.07■□□□□ 0
SNX1-214ENST00000625244 CAMK2BQ13554 666 aa15.07■□□□□ 0
SNX1-214ENST00000625244 CALCRLQ16602 461 aa15.07■□□□□ 0
SNX1-214ENST00000625244 BLOC1S2Q6QNY1 142 aa15.07■□□□□ 0
SNX1-214ENST00000625244 TAS1R3Q7RTX0 852 aa15.07■□□□□ 0
SNX1-214ENST00000625244 RABEPKQ7Z6M1 372 aa15.07■□□□□ 0
SNX1-214ENST00000625244 IL17RCQ8NAC3 791 aa15.07■□□□□ 0
SNX1-214ENST00000625244 LSM14AQ8ND56 463 aaKnown RBP15.07■□□□□ 0
SNX1-214ENST00000625244 STKLD1Q8NE28 680 aa15.07■□□□□ 0
SNX1-214ENST00000625244 ZBTB45Q96K62 511 aaPredicted RBP15.07■□□□□ 0
SNX1-214ENST00000625244 TCHPQ9BT92 498 aa15.07■□□□□ 0
SNX1-214ENST00000625244 ZDHHC4Q9NPG8 344 aa15.07■□□□□ 0
SNX1-214ENST00000625244 TOR4AQ9NXH8 423 aa15.07■□□□□ 0
SNX1-214ENST00000625244 PCOLCE2Q9UKZ9 415 aa15.07■□□□□ 0
SNX1-214ENST00000625244 ZNF638Q14966 1978 aaKnown RBP15.07■□□□□ 0
SNX1-214ENST00000625244 USP9XQ93008 2570 aaPredicted RBP15.07■□□□□ 0
SNX1-214ENST00000625244 TEX15Q9BXT5 2789 aa15.06■□□□□ 0
SNX1-214ENST00000625244 CITO14578 2027 aa15.06■□□□□ 0
SNX1-214ENST00000625244 RPS6KB1P23443 525 aa15.06■□□□□ 0
SNX1-214ENST00000625244 TIE1P35590 1138 aa15.06■□□□□ 0
SNX1-214ENST00000625244 FAM160A1Q05DH4 1040 aa15.06■□□□□ 0
SNX1-214ENST00000625244 MESP2Q0VG99 397 aa15.06■□□□□ 0
SNX1-214ENST00000625244 NR1H3Q13133 447 aa15.06■□□□□ 0
SNX1-214ENST00000625244 BYSLQ13895 437 aaKnown RBP15.06■□□□□ 0
SNX1-214ENST00000625244 GAB4Q2WGN9 574 aa15.06■□□□□ 0
SNX1-214ENST00000625244 SLC41A1Q8IVJ1 513 aa15.06■□□□□ 0
SNX1-214ENST00000625244 PGBD3Q8N328 593 aa15.06■□□□□ 0
SNX1-214ENST00000625244 MRPS31Q92665 395 aaKnown RBP15.06■□□□□ 0
SNX1-214ENST00000625244 SLC22A12Q96S37 553 aa15.06■□□□□ 0
SNX1-214ENST00000625244 CYP2S1Q96SQ9 504 aa15.06■□□□□ 0
SNX1-214ENST00000625244 MRPL4Q9BYD3 311 aaKnown RBP15.06■□□□□ 0
SNX1-214ENST00000625244 STK24Q9Y6E0 443 aa15.06■□□□□ 0
SNX1-214ENST00000625244 TCRBV21S2A2A0A5A6 115 aa15.05■□□□□ -0
SNX1-214ENST00000625244 ARHGEF35A5YM69 484 aa15.05■□□□□ -0
SNX1-214ENST00000625244 CPLX1O14810 134 aa15.05■□□□□ -0
SNX1-214ENST00000625244 PPEF2O14830 753 aa15.05■□□□□ -0
SNX1-214ENST00000625244 ARHGAP6O43182 974 aa15.05■□□□□ -0
SNX1-214ENST00000625244 ADAM23O75077 832 aa15.05■□□□□ -0
SNX1-214ENST00000625244 TADA3O75528 432 aa15.05■□□□□ -0
SNX1-214ENST00000625244 HAPLN1P10915 354 aaPredicted RBP15.05■□□□□ -0
SNX1-214ENST00000625244 GUCY2FP51841 1108 aa15.05■□□□□ -0
SNX1-214ENST00000625244 USP4Q13107 963 aa15.05■□□□□ -0
SNX1-214ENST00000625244 PLEKHG6Q3KR16 790 aa15.05■□□□□ -0
SNX1-214ENST00000625244 EMC10Q5UCC4 262 aa15.05■□□□□ -0
SNX1-214ENST00000625244 MPZL3Q6UWV2 235 aa15.05■□□□□ -0
SNX1-214ENST00000625244 SPRYD3Q8NCJ5 442 aa15.05■□□□□ -0
SNX1-214ENST00000625244 MTMR9Q96QG7 549 aa15.05■□□□□ -0
SNX1-214ENST00000625244 ZCWPW1Q9H0M4 648 aa15.05■□□□□ -0
SNX1-214ENST00000625244 TUFT1Q9NNX1 390 aa15.05■□□□□ -0
SNX1-214ENST00000625244 PHLPP2Q6ZVD8 1323 aa15.05■□□□□ -0
SNX1-214ENST00000625244 DENND4CQ5VZ89 1909 aa15.05■□□□□ -0
SNX1-214ENST00000625244 PLXND1Q9Y4D7 1925 aa15.05■□□□□ -0
SNX1-214ENST00000625244 HELZP42694 1942 aaKnown RBP15.04■□□□□ -0
SNX1-214ENST00000625244 A0A1W2PQD8 194 aa15.04■□□□□ -0
SNX1-214ENST00000625244 FAM149AA5PLN7 773 aa15.04■□□□□ -0
SNX1-214ENST00000625244 WNT7AO00755 349 aa15.04■□□□□ -0
SNX1-214ENST00000625244 ATXN1LP0C7T5 689 aaKnown RBP15.04■□□□□ -0
SNX1-214ENST00000625244 CXCL8P10145 99 aa15.04■□□□□ -0
SNX1-214ENST00000625244 GPR15P49685 360 aa15.04■□□□□ -0
SNX1-214ENST00000625244 ZBTB6Q15916 424 aa15.04■□□□□ -0
SNX1-214ENST00000625244 LRRTM3Q86VH5 581 aa15.04■□□□□ -0
SNX1-214ENST00000625244 SETD7Q8WTS6 366 aaKnown RBP15.04■□□□□ -0
SNX1-214ENST00000625244 KIFAP3Q92845 792 aa15.04■□□□□ -0
SNX1-214ENST00000625244 KCNB2Q92953 911 aa15.04■□□□□ -0
SNX1-214ENST00000625244 PNMA5Q96PV4 448 aa15.04■□□□□ -0
SNX1-214ENST00000625244 HNRNPABQ99729 332 aaKnown RBP15.04■□□□□ -0
SNX1-214ENST00000625244 TRPC7Q9HCX4 862 aa15.04■□□□□ -0
SNX1-214ENST00000625244 MAGED2Q9UNF1 606 aaPredicted RBP15.04■□□□□ -0
SNX1-214ENST00000625244 CCDC169A6NNP5 214 aa15.03■□□□□ -0
SNX1-214ENST00000625244 DKK1O94907 266 aa15.03■□□□□ -0
SNX1-214ENST00000625244 ODC1P11926 461 aa15.03■□□□□ -0
SNX1-214ENST00000625244 NPTX2P47972 431 aa15.03■□□□□ -0
SNX1-214ENST00000625244 SLC6A11P48066 632 aa15.03■□□□□ -0
SNX1-214ENST00000625244 PEX3P56589 373 aa15.03■□□□□ -0
SNX1-214ENST00000625244 LILRA4P59901 499 aa15.03■□□□□ -0
SNX1-214ENST00000625244 CFHR1Q03591 330 aa15.03■□□□□ -0
SNX1-214ENST00000625244 GRIK2Q13002 908 aa15.03■□□□□ -0
SNX1-214ENST00000625244 NR5A1Q13285 461 aa15.03■□□□□ -0
SNX1-214ENST00000625244 ZC2HC1CQ53FD0 456 aaPredicted RBP15.03■□□□□ -0
SNX1-214ENST00000625244 EOGTQ5NDL2 527 aa15.03■□□□□ -0
SNX1-214ENST00000625244 PCSK4Q6UW60 755 aa15.03■□□□□ -0
SNX1-214ENST00000625244 SLC36A4Q6YBV0 504 aa15.03■□□□□ -0
SNX1-214ENST00000625244 TRIML1Q8N9V2 468 aa15.03■□□□□ -0
SNX1-214ENST00000625244 SH3RF2Q8TEC5 729 aa15.03■□□□□ -0
SNX1-214ENST00000625244 SENP8Q96LD8 212 aa15.03■□□□□ -0
SNX1-214ENST00000625244 HSPA12BQ96MM6 686 aa15.03■□□□□ -0
SNX1-214ENST00000625244 TMEM134Q9H6X4 195 aa15.03■□□□□ -0
SNX1-214ENST00000625244 ABI2Q9NYB9 513 aaPredicted RBP15.03■□□□□ -0
SNX1-214ENST00000625244 SNX14Q9Y5W7 946 aa15.03■□□□□ -0
SNX1-214ENST00000625244 KNTC1P50748 2209 aa15.02■□□□□ -0
SNX1-214ENST00000625244 CEP192Q8TEP8 1941 aa15.02■□□□□ -0
SNX1-214ENST00000625244 PYCARD-AS1I3L0S3 204 aa15.02■□□□□ -0
SNX1-214ENST00000625244 NEMFO60524 1076 aa15.02■□□□□ -0
SNX1-214ENST00000625244 DTNBO60941 627 aa15.02■□□□□ -0
SNX1-214ENST00000625244 NFATC1O95644 943 aa15.02■□□□□ -0
SNX1-214ENST00000625244 CKMP06732 381 aa15.02■□□□□ -0
SNX1-214ENST00000625244 CYP3A5P20815 502 aa15.02■□□□□ -0
SNX1-214ENST00000625244 KIR2DL1P43626 348 aaPredicted RBP15.02■□□□□ -0
SNX1-214ENST00000625244 HSF5Q4G112 596 aaPredicted RBP15.02■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms