RNA–Protein interactions for RNA: ENST00000624953.1

CDKL5-208, Transcript of cyclin dependent kinase like 5, humanhuman

TSL 4

Gene CDKL5, Length 567 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5-208ENST00000624953 GRM1Q13255 1194 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 CRHR2Q13324 411 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 RAB39AQ14964 217 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 UBXN2BQ14CS0 331 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 AMOTQ4VCS5 1084 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 PLEKHO1Q53GL0 409 aaPredicted RBP3.98□□□□□ -1.77
CDKL5-208ENST00000624953 ATXN7L2Q5T6C5 722 aaPredicted RBP3.98□□□□□ -1.77
CDKL5-208ENST00000624953 SULT6B1Q6IMI4 303 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 EFCAB12Q6NXP0 572 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 TMPRSS9Q7Z410 1059 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 ARHGEF19Q8IW93 802 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 ZNF276Q8N554 614 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 RNF169Q8NCN4 708 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 IL17RDQ8NFM7 739 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 LARP4BQ92615 738 aaKnown RBP3.98□□□□□ -1.77
CDKL5-208ENST00000624953 PGBD4Q96DM1 585 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 C7orf25Q9BPX7 421 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 RTFDC1Q9BY42 306 aaPredicted RBP3.98□□□□□ -1.77
CDKL5-208ENST00000624953 LDAHQ9H6V9 325 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 TMEM74BQ9NUR3 256 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 TMEM140Q9NV12 185 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 SYBUQ9NX95 663 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 INTUQ9ULD6 942 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 ABT1Q9ULW3 272 aaKnown RBP3.98□□□□□ -1.77
CDKL5-208ENST00000624953 SORCS3Q9UPU3 1222 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 MRFAP1Q9Y605 127 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 MGAMO43451 1857 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 LAMA2P24043 3122 aaKnown RBP3.98□□□□□ -1.77
CDKL5-208ENST00000624953 HEG1Q9ULI3 1381 aa3.98□□□□□ -1.77
CDKL5-208ENST00000624953 COL4A3Q01955 1670 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 hCG_2014768A0A024R1R8 64 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 CENPVL1A0A0U1RR11 272 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 ALDH1L1O75891 902 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 A1BGP04217 495 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 ATP5JP18859 108 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 AKAP5P24588 427 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 CHN2P52757 468 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 SLC16A1P53985 500 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 KLF10Q13118 480 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 IL10RAQ13651 578 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 TTF1Q15361 905 aaPredicted RBP3.97□□□□□ -1.77
CDKL5-208ENST00000624953 MTHFSDQ2M296 383 aaKnown RBP3.97□□□□□ -1.77
CDKL5-208ENST00000624953 CRB2Q5IJ48 1285 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 B3GNTL1Q67FW5 361 aaPredicted RBP3.97□□□□□ -1.77
CDKL5-208ENST00000624953 ZNF627Q7L945 461 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 GPC2Q8N158 579 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 CNBD1Q8NA66 436 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 FBXO18Q8NFZ0 1043 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 MASTLQ96GX5 879 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 MLST8Q9BVC4 326 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 SENP6Q9GZR1 1112 aaPredicted RBP3.97□□□□□ -1.77
CDKL5-208ENST00000624953 CDH19Q9H159 772 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 VSX1Q9NZR4 365 aaPredicted RBP3.97□□□□□ -1.77
CDKL5-208ENST00000624953 SAP30BPQ9UHR5 308 aaKnown RBP3.97□□□□□ -1.77
CDKL5-208ENST00000624953 ING1Q9UK53 422 aaPredicted RBP3.97□□□□□ -1.77
CDKL5-208ENST00000624953 DNM3Q9UQ16 869 aa3.97□□□□□ -1.77
CDKL5-208ENST00000624953 PRUNE2Q8WUY3 3088 aa3.96□□□□□ -1.77
CDKL5-208ENST00000624953 SPTBN5Q9NRC6 3674 aaKnown RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 PRSS29PA6NIE9 313 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 RNASET2O00584 256 aaKnown RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 AKAP10O43572 662 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 XPOTO43592 962 aaKnown RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 FAM20BO75063 409 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 PPFIA4O75335 1185 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 SLC43A1O75387 559 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 RFPL1O75677 317 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 HMOX1P09601 288 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 IBSPP21815 317 aaPredicted RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 TGM1P22735 817 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 PROZP22891 400 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 SLC6A2P23975 617 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 PTGS2P35354 604 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 MAP2K2P36507 400 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 GDF5P43026 501 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 RNASE9P60153 205 aaKnown RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 PURAQ00577 322 aaKnown RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 KIF23Q02241 960 aaPredicted RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 OCA2Q04671 838 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 ABHD18Q0P651 414 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 PIN1Q13526 163 aaPredicted RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 CLUL1Q15846 466 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 HLFQ16534 295 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 CRY2Q49AN0 593 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 FLYWCH1Q4VC44 716 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 CCDC93Q567U6 631 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 C1orf141Q5JVX7 400 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 ARMC6Q6NXE6 501 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 B3GNT9Q6UX72 402 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 PNMA8AQ86V59 439 aaPredicted RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 SYNE4Q8N205 404 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 PPM1NQ8N819 430 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 IL17REQ8NFR9 667 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 STON2Q8WXE9 905 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 LINC00476Q8WZB0 136 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 HOOK2Q96ED9 719 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 GLIS2Q9BZE0 524 aaPredicted RBP3.96□□□□□ -1.78
CDKL5-208ENST00000624953 MMRN2Q9H8L6 949 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 AKIP1Q9NQ31 210 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 SLC2A4RGQ9NR83 387 aa3.96□□□□□ -1.78
CDKL5-208ENST00000624953 SIDT1Q9NXL6 827 aaKnown RBP3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms