RNA–Protein interactions for RNA: ENST00000622755.4

CBWD3-218, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,413 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-218ENST00000622755 FGFR1OPO95684 399 aaKnown RBP13.15□□□□□ -0.3
CBWD3-218ENST00000622755 GJA1P17302 382 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 ATF6P18850 670 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 CYP2F1P24903 491 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 PTPN5P54829 565 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 GPC5P78333 572 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 DCAF17Q5H9S7 520 aaPredicted RBP13.15□□□□□ -0.3
CBWD3-218ENST00000622755 MDH1BQ5I0G3 518 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 WDR44Q5JSH3 913 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 FAM78AQ5JUQ0 283 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 KRT39Q6A163 491 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 FAM171BQ6P995 826 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 SCARA5Q6ZMJ2 495 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 OSTM1Q86WC4 334 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 TMC8Q8IU68 726 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 TTC39CQ8N584 583 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 B3GALNT2Q8NCR0 500 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 CSGALNACT1Q8TDX6 532 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 KBTBD7Q8WVZ9 684 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 DNASE1L2Q92874 299 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 MYLPFQ96A32 169 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 MRPL45Q9BRJ2 306 aaKnown RBP13.15□□□□□ -0.3
CBWD3-218ENST00000622755 TASP1Q9H6P5 420 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 METTL14Q9HCE5 456 aaKnown RBP13.15□□□□□ -0.3
CBWD3-218ENST00000622755 TMEM8AQ9HCN3 771 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 NOTCH4Q99466 2003 aa13.15□□□□□ -0.3
CBWD3-218ENST00000622755 MYBPHLA2RUH7 354 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 HLA-DRAP01903 254 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 PTPN1P18031 435 aaKnown RBP13.14□□□□□ -0.31
CBWD3-218ENST00000622755 AOC1P19801 751 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 BDNFP23560 247 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 CCR2P41597 374 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 GCLMP48507 274 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 MXI1P50539 228 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 CDR1P51861 262 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 DLG4P78352 724 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 CETN1Q12798 172 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 MLF2Q15773 248 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-218ENST00000622755 DDR2Q16832 855 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 CCDC40Q4G0X9 1142 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 TANGO2Q6ICL3 276 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 PHLDB3Q6NSJ2 640 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 C1orf228Q6PIY5 440 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 LIMS2Q7Z4I7 341 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 TRIML1Q8N9V2 468 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 ST13P5Q8NFI4 369 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-218ENST00000622755 SPATA20Q8TB22 786 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 TRMT2BQ96GJ1 504 aaKnown RBP13.14□□□□□ -0.31
CBWD3-218ENST00000622755 PCED1BQ96HM7 432 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 NELL2Q99435 816 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 XYLT2Q9H1B5 865 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 TBC1D17Q9HA65 648 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 TRPV4Q9HBA0 871 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 TMLHEQ9NVH6 421 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 OBP2AQ9NY56 170 aa13.14□□□□□ -0.31
CBWD3-218ENST00000622755 ARMCX3Q9UH62 379 aaPredicted RBP13.14□□□□□ -0.31
CBWD3-218ENST00000622755 SLC38A8A6NNN8 435 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 MAN2B1O00754 1011 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 TRIM49P0CI25 452 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 TRIM49CP0CI26 452 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 CCNE1P24864 410 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 LMO2P25791 158 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 GDI1P31150 447 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 PPP3CCP48454 512 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ZCWPW2Q504Y3 356 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ARHGAP29Q52LW3 1261 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 SLC44A4Q53GD3 710 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 KLHL10Q6JEL2 608 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 CC2D1AQ6P1N0 951 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 DENND5BQ6ZUT9 1274 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 UNC93AQ86WB7 457 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ARID3BQ8IVW6 561 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 MFSD6LQ8IWD5 586 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ADSSL1Q8N142 457 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 CELF5Q8N6W0 485 aaKnown RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 PLEKHO2Q8TD55 490 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 MSANTD3Q96H12 275 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 SPATA17Q96L03 361 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 CEP63Q96MT8 703 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 GBP4Q96PP9 640 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 SLITRK1Q96PX8 696 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 LRRC3Q9BY71 257 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 KIF9Q9HAQ2 790 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 CYP3A43Q9HB55 503 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ZNF334Q9HCZ1 680 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 MAN1B1Q9UKM7 699 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 SIT1Q9Y3P8 196 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 NUP210Q8TEM1 1887 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 HEPACAM2A8MVW5 462 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ATP2C2O75185 946 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 NOL4O94818 638 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 GNA14O95837 355 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 ASS1P00966 412 aaKnown RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 PDGFBP01127 241 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 NLRP12P59046 1061 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 YWHAEP62258 255 aaKnown RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 NOP14P78316 857 aaKnown RBP13.13□□□□□ -0.31
CBWD3-218ENST00000622755 CYP4F8P98187 520 aa13.13□□□□□ -0.31
CBWD3-218ENST00000622755 GRM2Q14416 872 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms