RNA–Protein interactions for RNA: ENST00000622629.4

MSH6-215, Transcript of mutS homolog 6, humanhuman

TSL 5 BASIC

Gene MSH6, Length 4,324 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-215ENST00000622629 NDUFAF2Q8N183 169 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 BSNDQ8WZ55 320 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 PGBD4Q96DM1 585 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 MAGEB18Q96M61 343 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 PAFAH2Q99487 392 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ZFATQ9P243 1243 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 PAK5Q9P286 719 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 PIN4Q9Y237 131 aaKnown RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 DNALI1O14645 258 aaPredicted RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 IL18RAPO95256 599 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 VTNP04004 478 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 NUDT17P0C025 328 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ALDH18A1P54886 795 aaKnown RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 TAS2R40P59535 323 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 MMEL1Q495T6 779 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 EXOC3L1Q86VI1 746 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 FUKQ8N0W3 1084 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 SIK2Q9H0K1 926 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 MANSC1Q9H8J5 431 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 STAP1Q9ULZ2 295 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 FSBPO95073 299 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 RARBP10826 455 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 PTPRAP18433 802 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 PTPN11Q06124 597 aaPredicted RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 CNGA2Q16280 664 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 GOLGA7BQ2TAP0 167 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ZNF572Q7Z3I7 529 aaPredicted RBP13.43□□□□□ -0.26
MSH6-215ENST00000622629 SLFN11Q7Z7L1 901 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 ARMC2Q8NEN0 867 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 CLMNQ96JQ2 1002 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 LRRC19Q9H756 370 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 BFARQ9NZS9 450 aa13.43□□□□□ -0.26
MSH6-215ENST00000622629 FOXO6A8MYZ6 492 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 ELF1P32519 619 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 PGM1P36871 562 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 NCKAP1LP55160 1127 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 PTK6Q13882 451 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 LRRC6Q86X45 466 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 KIRREL3Q8IZU9 778 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 TTC39CQ8N584 583 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 RAB3IL1Q8TBN0 382 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 CPB2Q96IY4 423 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 CYP39A1Q9NYL5 469 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 USP18Q9UMW8 372 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 R3HDM2Q9Y2K5 976 aaKnown RBP13.42□□□□□ -0.26
MSH6-215ENST00000622629 AKAP11Q9UKA4 1901 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 CRYBG1Q9Y4K1 1723 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 A0A087WZ62 844 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 FSCN2O14926 492 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 SNRPAP09012 282 aaKnown RBP13.42□□□□□ -0.26
MSH6-215ENST00000622629 STAG3L1P0CL83 205 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 DRD4P21917 467 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 ARL13BQ3SXY8 428 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 METTL7BQ6UX53 244 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 NLRP9Q7RTR0 991 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 ARID3BQ8IVW6 561 aaPredicted RBP13.42□□□□□ -0.26
MSH6-215ENST00000622629 RXFP2Q8WXD0 754 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 VCPIP1Q96JH7 1222 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 FDXACB1Q9BRP7 624 aaPredicted RBP13.42□□□□□ -0.26
MSH6-215ENST00000622629 PORCNQ9H237 461 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 FNDC3AQ9Y2H6 1198 aaKnown RBP13.42□□□□□ -0.26
MSH6-215ENST00000622629 L3MBTL1Q9Y468 752 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 MYH7P12883 1935 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 DYNC1LI2O43237 492 aaPredicted RBP13.42□□□□□ -0.26
MSH6-215ENST00000622629 MYL3P08590 195 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 STIP1P31948 543 aaKnown RBP13.42□□□□□ -0.26
MSH6-215ENST00000622629 TNFSF9P41273 254 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 PTGER2P43116 358 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 MAP3K21Q5TCX8 1036 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 BRSK2Q8IWQ3 736 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 AGGF1Q8N302 714 aaeCLIP13.42□□□□□ -0.26
MSH6-215ENST00000622629 HELQQ8TDG4 1101 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 ZNF518BQ9C0D4 1074 aa13.42□□□□□ -0.26
MSH6-215ENST00000622629 GRAMD1BQ3KR37 738 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 ART4Q93070 314 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 SPATC1LQ9H0A9 340 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 HEY2Q9UBP5 337 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 SCOCQ9UIL1 159 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 MAGEB2O15479 319 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 LSM8O95777 96 aaKnown RBP13.41□□□□□ -0.26
MSH6-215ENST00000622629 THOC5Q13769 683 aaKnown RBP13.41□□□□□ -0.26
MSH6-215ENST00000622629 EFHC2Q5JST6 749 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 C12orf56Q8IXR9 622 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 PCDH9Q9HC56 1237 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 PABPN1LA6NDY0 278 aaKnown RBP13.41□□□□□ -0.26
MSH6-215ENST00000622629 SNX3O60493 162 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 SLC4A1P02730 911 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 RFC1P35251 1148 aaPredicted RBP13.41□□□□□ -0.26
MSH6-215ENST00000622629 BOLA3Q53S33 107 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 DCAF6Q58WW2 860 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 WWP1Q9H0M0 922 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 CXorf56Q9H5V9 222 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 SLC24A3Q9HC58 644 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 KLK14Q9P0G3 267 aa13.41□□□□□ -0.26
MSH6-215ENST00000622629 CICQ96RK0 1608 aaPredicted RBP13.41□□□□□ -0.26
MSH6-215ENST00000622629 ZNF862O60290 1169 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 TBC1D12O60347 775 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 NPTXRO95502 500 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 SRGAP2BP0DMP2 458 aa13.4□□□□□ -0.26
MSH6-215ENST00000622629 UBA1P22314 1058 aaKnown RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms