RNA–Protein interactions for RNA: ENST00000621783.4

CPNE3-212, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 817 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-212ENST00000621783 MYBPHLA2RUH7 354 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 GRID2IPA4D2P6 1211 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 CLDN5O00501 218 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 GJB5O95377 273 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 TUBB4AP04350 444 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 CALB1P05937 261 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 SETSIPP0DME0 302 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 LAG3P18627 525 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 FGFR3P22607 806 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 RRM1P23921 792 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 GPD2P43304 727 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 NOP2P46087 812 aaKnown RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 NAP1L1P55209 391 aaKnown RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 ELAVL2Q12926 359 aaKnown RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 TCEAL1Q15170 157 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 IFI16Q16666 785 aaKnown RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 VARS2Q5ST30 1063 aaKnown RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 SPOUT1Q5T280 376 aaKnown RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 LIN9Q5TKA1 542 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 FAM171A1Q5VUB5 890 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 LLGL2Q6P1M3 1020 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 FAM35AQ86V20 835 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 ERICH1Q86X53 443 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 RHOT2Q8IXI1 618 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 FUKQ8N0W3 1084 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 THEM5Q8N1Q8 247 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 MSANTD4Q8NCY6 345 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 TRIM58Q8NG06 486 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 TPCN2Q8NHX9 752 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 SLC35G2Q8TBE7 412 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 MYCBPAPQ8TBZ2 947 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 HERVK_113Q902F9 699 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 ZNF592Q92610 1267 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 MYLPFQ96A32 169 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 VCPIP1Q96JH7 1222 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 ZNF558Q96NG5 402 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 ALS2CR12Q96Q35 445 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 TMEM209Q96SK2 561 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 CPXM1Q96SM3 734 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 PKMYT1Q99640 499 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 HNRNPABQ99729 332 aaKnown RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 LBHD1Q9BQE6 289 aaPredicted RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 ACBD6Q9BR61 282 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 NUP85Q9BW27 656 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 B3GNT5Q9BYG0 378 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 GPR62Q9BZJ7 368 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 ADAM22Q9P0K1 906 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 CXXC1Q9P0U4 656 aaPredicted RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 CTTNBP2NLQ9P2B4 639 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 CHORDC1Q9UHD1 332 aaPredicted RBP11.28□□□□□ -0.6
CPNE3-212ENST00000621783 COG5Q9UP83 839 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 PCDHGC5Q9Y5F6 944 aa11.28□□□□□ -0.6
CPNE3-212ENST00000621783 NLRC5Q86WI3 1866 aa11.27□□□□□ -0.6
CPNE3-212ENST00000621783 CCDC85CA6NKD9 419 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 TULP2O00295 520 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 PALMO75781 387 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 MTA2O94776 668 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 ERBB2P04626 1255 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 CASQ1P31415 396 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 ALDH7A1P49419 539 aaKnown RBP11.27□□□□□ -0.61
CPNE3-212ENST00000621783 HADHBP55084 474 aaKnown RBP11.27□□□□□ -0.61
CPNE3-212ENST00000621783 GSCP56915 257 aaPredicted RBP11.27□□□□□ -0.61
CPNE3-212ENST00000621783 HTRA4P83105 476 aaPredicted RBP11.27□□□□□ -0.61
CPNE3-212ENST00000621783 TSPY1Q01534 308 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 PDE4CQ08493 712 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 BST2Q10589 180 aaKnown RBP11.27□□□□□ -0.61
CPNE3-212ENST00000621783 CYP4A22Q5TCH4 519 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 ZNF280DQ6N043 979 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 KCNT2Q6UVM3 1135 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.27□□□□□ -0.61
CPNE3-212ENST00000621783 PAQR9Q6ZVX9 377 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 PHLDB2Q86SQ0 1253 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 SLC39A11Q8N1S5 342 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 ANKRD52Q8NB46 1076 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 COLGALT1Q8NBJ5 622 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 ZNF564Q8TBZ8 553 aaPredicted RBP11.27□□□□□ -0.61
CPNE3-212ENST00000621783 IPO4Q8TEX9 1081 aaKnown RBP11.27□□□□□ -0.61
CPNE3-212ENST00000621783 DPF3Q92784 378 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 PCED1BQ96HM7 432 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 IGSF21Q96ID5 467 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 B3GALT6Q96L58 329 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 SLC9A7Q96T83 725 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 MED10Q9BTT4 135 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 KRT82Q9NSB4 513 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 UVRAGQ9P2Y5 699 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 TJP2Q9UDY2 1190 aa11.27□□□□□ -0.61
CPNE3-212ENST00000621783 TCRBV5S1A1TA0A578 114 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 XPO1O14980 1071 aaKnown RBP11.26□□□□□ -0.61
CPNE3-212ENST00000621783 OAZ2O95190 189 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 GJB6O95452 261 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 EFEMP2O95967 443 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 FAM200BP0CF97 657 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 NPR3P17342 541 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 RGS7P49802 495 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 PLCB3Q01970 1234 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 CTXN3Q4LDR2 81 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 RTP2Q5QGT7 225 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 PLEKHA7Q6IQ23 1121 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 DNAJC24Q6P3W2 148 aa11.26□□□□□ -0.61
CPNE3-212ENST00000621783 FAM171BQ6P995 826 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms