RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 ZNF334Q9HCZ1 680 aaPredicted RBP11.51□□□□□ -0.57
TARDBP-223ENST00000620632 FANCLQ9NW38 375 aa11.51□□□□□ -0.57
TARDBP-223ENST00000620632 HSFX1Q9UBD0 423 aa11.51□□□□□ -0.57
TARDBP-223ENST00000620632 PRKAG3Q9UGI9 489 aa11.51□□□□□ -0.57
TARDBP-223ENST00000620632 NUP210Q8TEM1 1887 aaPredicted RBP11.51□□□□□ -0.57
TARDBP-223ENST00000620632 TTC28Q96AY4 2481 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 XYLBO75191 536 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 CCDC130P13994 396 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 PTMSP20962 102 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 BDNFP23560 247 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 MYL5Q02045 173 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 CYP27A1Q02318 531 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 MTMR3Q13615 1198 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 CUL2Q13617 745 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 MAN2A1Q16706 1144 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 DDR2Q16832 855 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 ZSCAN23Q3MJ62 389 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 CFAP221Q4G0U5 840 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 PABPC1LQ4VXU2 614 aaKnown RBP11.5□□□□□ -0.57
TARDBP-223ENST00000620632 ZNF394Q53GI3 561 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 WDR44Q5JSH3 913 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 PHLDB3Q6NSJ2 640 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 DPY19L2P1Q6NXN4 242 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 GJB7Q6PEY0 223 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 UNC93AQ86WB7 457 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 SPATA2LQ8IUW3 424 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-223ENST00000620632 DHX40Q8IX18 779 aaKnown RBP11.5□□□□□ -0.57
TARDBP-223ENST00000620632 AOPEPQ8N6M6 819 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 CCDC150Q8NCX0 1101 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 EHBP1Q8NDI1 1231 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 ST13P5Q8NFI4 369 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-223ENST00000620632 FAXDC2Q96IV6 333 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 KREMEN1Q96MU8 473 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 TUBGCP2Q9BSJ2 902 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 INTS2Q9H0H0 1204 aaKnown RBP11.5□□□□□ -0.57
TARDBP-223ENST00000620632 ABCB6Q9NP58 842 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 CISHQ9NSE2 258 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 FAM49BQ9NUQ9 324 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 TAB2Q9NYJ8 693 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 GCNT4Q9P109 453 aa11.5□□□□□ -0.57
TARDBP-223ENST00000620632 AJAP1Q9UKB5 411 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-223ENST00000620632 PRKCSHP14314 528 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-223ENST00000620632 ZNF18P17022 549 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 HMGA1P17096 107 aaKnown RBP11.49□□□□□ -0.57
TARDBP-223ENST00000620632 GJA1P17302 382 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 CEBPBP17676 345 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 PTPN2P17706 415 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 SLC9A1P19634 815 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 ACO1P21399 889 aaKnown RBP11.49□□□□□ -0.57
TARDBP-223ENST00000620632 FSHRP23945 695 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 ALDH1A3P47895 512 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 TUFMP49411 452 aaKnown RBP11.49□□□□□ -0.57
TARDBP-223ENST00000620632 RAD23BP54727 409 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 EPHA5P54756 1037 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 KRT31Q15323 416 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 VWA3BQ502W6 1294 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 TRIM65Q6PJ69 517 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 RRAGAQ7L523 313 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 APTXQ7Z2E3 356 aaKnown RBP11.49□□□□□ -0.57
TARDBP-223ENST00000620632 DNAJB7Q7Z6W7 309 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-223ENST00000620632 FAM35AQ86V20 835 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 FAM114A1Q8IWE2 563 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 FUKQ8N0W3 1084 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 GJD3Q8N144 294 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 CRYBG2Q8N1P7 616 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 SLC4A11Q8NBS3 891 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 ING5Q8WYH8 240 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 PSMG2Q969U7 264 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 FUBP3Q96I24 572 aaKnown RBP eCLIP11.49□□□□□ -0.57
TARDBP-223ENST00000620632 NT5C1BQ96P26 610 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 NDST4Q9H3R1 872 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 IL21Q9HBE4 155 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 SIX2Q9NPC8 291 aa11.49□□□□□ -0.57
TARDBP-223ENST00000620632 AVENQ9NQS1 362 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-223ENST00000620632 MAGEC2Q9UBF1 373 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-223ENST00000620632 HELZP42694 1942 aaKnown RBP11.48□□□□□ -0.57
TARDBP-223ENST00000620632 F8VP50 259 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 RNF225M0QZC1 329 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-223ENST00000620632 TADA3O75528 432 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 BEST1O76090 585 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 CALCAP01258 141 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 MYL4P12829 197 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 ATP1A3P13637 1013 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 EEF1GP26641 437 aaKnown RBP11.48□□□□□ -0.57
TARDBP-223ENST00000620632 PON1P27169 355 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 MAGEA11P43364 429 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 EPHB3P54753 998 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 KCNMA1Q12791 1236 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 PLD1Q13393 1074 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 IQCB1Q15051 598 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 MAPRE1Q15691 268 aaKnown RBP11.48□□□□□ -0.57
TARDBP-223ENST00000620632 C4orf50Q6ZRC1 276 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 GAREM2Q75VX8 874 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 TMEM150AQ86TG1 271 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 SCN4BQ8IWT1 228 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 NPAS3Q8IXF0 933 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 PPM1KQ8N3J5 372 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 TDRD5Q8NAT2 981 aaKnown RBP11.48□□□□□ -0.57
TARDBP-223ENST00000620632 ZMIZ2Q8NF64 920 aa11.48□□□□□ -0.57
TARDBP-223ENST00000620632 SHKBP1Q8TBC3 707 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms