RNA–Protein interactions for RNA: ENST00000620393.4

CPNE3-209, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 680 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-209ENST00000620393 ADGRG1Q9Y653 693 aa8.52□□□□□ -1.05
CPNE3-209ENST00000620393 CITO14578 2027 aa8.52□□□□□ -1.05
CPNE3-209ENST00000620393 ANK1P16157 1881 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 LINC01553A4QN01 128 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 RTN2O75298 545 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 FGF18O76093 207 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 MICAL2O94851 1124 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 IPO7O95373 1038 aaKnown RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 LSM8O95777 96 aaKnown RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 FTLP02792 175 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 SOD2P04179 222 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 RB1P06400 928 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 UNGP13051 313 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 MYOGP15173 224 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 CDH5P33151 784 aaPredicted RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 GPD2P43304 727 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 PSMC1P62191 440 aaKnown RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 TSPY1Q01534 308 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 CYP27A1Q02318 531 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 DSG1Q02413 1049 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 MAPRE1Q15691 268 aaKnown RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 CLEC16AQ2KHT3 1053 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 CTXN3Q4LDR2 81 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 RTP2Q5QGT7 225 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 ZNF280DQ6N043 979 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 KIAA1841Q6NSI8 718 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 PPP1R2P3Q6NXS1 205 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 DENND1BQ6P3S1 775 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 PAQR9Q6ZVX9 377 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 PALB2Q86YC2 1186 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 DCP1BQ8IZD4 617 aaKnown RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 ANKRD52Q8NB46 1076 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 KLHL23Q8NBE8 558 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 OR10T2Q8NGX3 314 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 KIAA1524Q8TCG1 905 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 PIK3R5Q8WYR1 880 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 PKMYT1Q99640 499 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 HERC2P3Q9BVR0 1158 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 B3GNT5Q9BYG0 378 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 ZCWPW1Q9H0M4 648 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 KCND1Q9NSA2 647 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 SEPT11Q9NVA2 429 aaKnown RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 GTF3C4Q9UKN8 822 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 TSPAN16Q9UKR8 245 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 REXO2Q9Y3B8 237 aaKnown RBP8.51□□□□□ -1.05
CPNE3-209ENST00000620393 BACE2Q9Y5Z0 518 aa8.51□□□□□ -1.05
CPNE3-209ENST00000620393 ALPK3Q96L96 1907 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 C5orf67F2Z3F1 127 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 ZSCAN12O43309 604 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 LILRB3O75022 631 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 H2AFZP0C0S5 128 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 CCDC175P0C221 793 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 SSTR3P32745 418 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-209ENST00000620393 ERVK-21P61565 698 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 SMARCB1Q12824 385 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 NFE2Q16621 373 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-209ENST00000620393 PKDCCQ504Y2 493 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 MDH1BQ5I0G3 518 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 RSPO2Q6UXX9 243 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-209ENST00000620393 ZNF662Q6ZS27 426 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 H2AFVQ71UI9 128 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 ZSCAN30Q86W11 494 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 PHF13Q86YI8 300 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-209ENST00000620393 PASD1Q8IV76 773 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 REXO1L1PQ8IX06 675 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 FUKQ8N0W3 1084 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 VPS52Q8N1B4 723 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 ZNF454Q8N9F8 522 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 ACRBPQ8NEB7 543 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 UBA3Q8TBC4 463 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 SPPL3Q8TCT6 385 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 SLC2A14Q8TDB8 520 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 SLC35F5Q8WV83 523 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 CPA5Q8WXQ8 436 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 RIN2Q8WYP3 895 aaPredicted RBP8.5□□□□□ -1.05
CPNE3-209ENST00000620393 PCED1BQ96HM7 432 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 VCPIP1Q96JH7 1222 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 B3GALT6Q96L58 329 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 SAMD11Q96NU1 681 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 TMEM209Q96SK2 561 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 DESI2Q9BSY9 194 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 DUSP16Q9BY84 665 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 UBXN6Q9BZV1 441 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 LUC7LQ9NQ29 371 aaKnown RBP8.5□□□□□ -1.05
CPNE3-209ENST00000620393 FAM49BQ9NUQ9 324 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 TMLHEQ9NVH6 421 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 TAS2R14Q9NYV8 317 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 MTRRQ9UBK8 725 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 HESX1Q9UBX0 185 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 INTUQ9ULD6 942 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 LZTS1Q9Y250 596 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 SSX2IPQ9Y2D8 614 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 PPP2R2CQ9Y2T4 447 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 CEP83Q9Y592 693 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 TRIP11Q15643 1979 aa8.5□□□□□ -1.05
CPNE3-209ENST00000620393 SCN1AP35498 2009 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 MICAL3Q7RTP6 2002 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 RALGAPA2Q2PPJ7 1873 aa8.49□□□□□ -1.05
CPNE3-209ENST00000620393 ANKRD62A6NC57 917 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms