RNA–Protein interactions for RNA: ENST00000618902.1

SHMT1-211, Transcript of serine hydroxymethyltransferase 1, humanhuman

TSL 5 BASIC

Gene SHMT1, Length 378 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1-211ENST00000618902 ARMCX3Q9UH62 379 aaPredicted RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 AFF4Q9UHB7 1163 aaKnown RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 FBXL5Q9UKA1 691 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 FBXW11Q9UKB1 542 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 AJAP1Q9UKB5 411 aaPredicted RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 COQ4Q9Y3A0 265 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 V9GYY5 206 aaPredicted RBP5.61□□□□□ -1.51
SHMT1-211ENST00000618902 CFAP54Q96N23 3096 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF292O60281 2723 aa5.61□□□□□ -1.51
SHMT1-211ENST00000618902 PTPRZ1P23471 2315 aaPredicted RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 NOTCH4Q99466 2003 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 CCDC195A0A1B0GUA6 201 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 WDR27A2RRH5 827 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 KPNA7A9QM74 516 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 NRG2O14511 850 aaPredicted RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 GABRDO14764 452 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TGM5O43548 720 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ATP2C2O75185 946 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 RFPL2O75678 378 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 SEC24AO95486 1093 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 STAU1O95793 577 aaKnown RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 KRT13P13646 458 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 PFKLP17858 780 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 CDK11BP21127 795 aaKnown RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ACAT1P24752 427 aaKnown RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 WEE1P30291 646 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ATICP31939 592 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 GTF2H1P32780 548 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 OR1D2P34982 312 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ASPAP45381 313 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 FMO5P49326 533 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 MXI1P50539 228 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 MLLT6P55198 1093 aaPredicted RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ROR1Q01973 937 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 DMTNQ08495 405 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 SIGLEC14Q08ET2 396 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 KCNH2Q12809 1159 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 MYO1EQ12965 1108 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ORC1Q13415 861 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 BIRC3Q13489 604 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TRIM14Q14142 442 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 KRT31Q15323 416 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 MAPRE1Q15691 268 aaKnown RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 NFE2Q16621 373 aaPredicted RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 PTPN21Q16825 1174 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF699Q32M78 642 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 SV2CQ496J9 727 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 CCDC40Q4G0X9 1142 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 DCAF17Q5H9S7 520 aaPredicted RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TEX35Q5T0J7 233 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TCERG1LQ5VWI1 586 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 SPECC1LQ69YQ0 1117 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 OVOS1Q6IE37 1185 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 LLGL2Q6P1M3 1020 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 POTEHQ6S545 545 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 DSTYKQ6XUX3 929 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 SCARA5Q6ZMJ2 495 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 MTSS1LQ765P7 747 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 METTL23Q86XA0 190 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 PALB2Q86YC2 1186 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 VSTM4Q8IW00 320 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 KRT222Q8N1A0 295 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 THEM5Q8N1Q8 247 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TTC39CQ8N584 583 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 AOPEPQ8N6M6 819 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TTC9BQ8N6N2 239 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 UBR7Q8N806 425 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TDRD5Q8NAT2 981 aaKnown RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 KREMEN2Q8NCW0 462 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 WHAMMQ8TF30 809 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 UBXN4Q92575 508 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 KAT5Q92993 513 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF707Q96C28 371 aaPredicted RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 PKNOX2Q96KN3 472 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 C16orf45Q96MC5 204 aaPredicted RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 PANX2Q96RD6 677 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TWNKQ96RR1 684 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ARID3AQ99856 593 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 XPO4Q9C0E2 1151 aaKnown RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 DPEP3Q9H4B8 488 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 THAP9Q9H5L6 903 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ABCB6Q9NP58 842 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 SIX2Q9NPC8 291 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 CRTAC1Q9NQ79 661 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 MAN1C1Q9NR34 630 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TMEM30AQ9NV96 361 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 TAB2Q9NYJ8 693 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 IFNKQ9P0W0 207 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 NXF1Q9UBU9 619 aaKnown RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 BARX2Q9UMQ3 279 aaPredicted RBP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 SORCS3Q9UPU3 1222 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 HCN4Q9Y3Q4 1203 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 NFE2L3Q9Y4A8 694 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP5.6□□□□□ -1.51
SHMT1-211ENST00000618902 SNX9Q9Y5X1 595 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 CDY1Q9Y6F8 540 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 ZNF318Q5VUA4 2279 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 DOCK8Q8NF50 2099 aa5.6□□□□□ -1.51
SHMT1-211ENST00000618902 MYO10Q9HD67 2058 aa5.59□□□□□ -1.51
SHMT1-211ENST00000618902 TCF20Q9UGU0 1960 aaKnown RBP5.59□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms