RNA–Protein interactions for RNA: ENST00000618865.4

SEMA3B-213, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SEMA3B, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-213ENST00000618865 BBOF1Q8ND07 529 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 CXorf38Q8TB03 319 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 DYDC1Q8WWB3 177 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 BCO2Q9BYV7 579 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 RPF1Q9H9Y2 349 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 METTL5Q9NRN9 209 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 ADARB2Q9NS39 739 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 FGFR1OP2Q9NVK5 253 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 PPME1Q9Y570 386 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 IFNB1P01574 187 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 KRT3P12035 628 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 PSMC1P62191 440 aaKnown RBP17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 DRICH1Q6PGQ1 229 aaPredicted RBP17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 RELL1Q8IUW5 271 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 SLC4A11Q8NBS3 891 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 SMARCAD1Q9H4L7 1026 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 LGALS13Q9UHV8 139 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 GGT7Q9UJ14 662 aa17.7■□□□□ 0.42
SEMA3B-213ENST00000618865 CCT8L1PA6NM43 557 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 GOLGA8MH3BSY2 632 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 STAG3L1P0CL83 205 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 PLCB3Q01970 1234 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 RAB6CQ53S08 254 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 ZNF667Q5HYK9 610 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 SWT1Q5T5J6 900 aaKnown RBP17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 ADAM33Q9BZ11 813 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 RAB6CQ9H0N0 254 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 TNFSF13BQ9Y275 285 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 A0A087WZ62 844 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 SPDYE5A6NIY4 337 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 SGK1O00141 431 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 PIK3R2O00459 728 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 TTLL12Q14166 644 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 TFDP1Q14186 410 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 TMED2Q15363 201 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 XYLT1Q86Y38 959 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 FDXACB1Q9BRP7 624 aaPredicted RBP17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 PCSK1NQ9UHG2 260 aa17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 TPX2Q9ULW0 747 aaKnown RBP17.69■□□□□ 0.42
SEMA3B-213ENST00000618865 SIGLEC16A6NMB1 481 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 INSRRP14616 1297 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 YWHAEP62258 255 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 LMNB2Q03252 620 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 MTM1Q13496 603 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 AMHR2Q16671 573 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 LACTB2Q53H82 288 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 RNASEH2BQ5TBB1 312 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 SLC40A1Q9NP59 571 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 HAUS2Q9NVX0 235 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 HBP1O60381 514 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 VTNP04004 478 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 PTPN7P35236 360 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 NRLP54845 237 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 COPS2P61201 443 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 OTUD4Q01804 1114 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 DPH6Q7L8W6 267 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 SLC35B2Q8TB61 432 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 ACTL9Q8TC94 416 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 NKD2Q969F2 451 aaPredicted RBP17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 ABCF3Q9NUQ8 709 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 DRG1Q9Y295 367 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 CXCL11O14625 94 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 CDH16O75309 829 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 TAP1Q03518 808 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 CCDC142Q17RM4 750 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 ANKRD22Q5VYY1 191 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 MAML1Q92585 1016 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 OPTNQ96CV9 577 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 MRRFQ96E11 262 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 LHX5Q9H2C1 402 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 PDZD7Q9H5P4 517 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 KIF9Q9HAQ2 790 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 DDX56Q9NY93 547 aaKnown RBP17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 SAMD15Q9P1V8 674 aa17.68■□□□□ 0.42
SEMA3B-213ENST00000618865 TRIP11Q15643 1979 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 CST8O60676 142 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 PIAS1O75925 651 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 MICAL2O94851 1124 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 CYP2C8P10632 490 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 ARHGAP1Q07960 439 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 STAT4Q14765 748 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 SH3PXD2AQ5TCZ1 1133 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 MAP1SQ66K74 1059 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 ANKRD13AQ8IZ07 590 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 UBA3Q8TBC4 463 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 CDCA5Q96FF9 252 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 CXCL16Q9H2A7 254 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 ACTR5Q9H9F9 607 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 KCNH4Q9UQ05 1017 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 POC1B-GALNT4F8VUJ3 575 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 SNX3O60493 162 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 RASSF9O75901 435 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 OAS1P00973 400 aaKnown RBP17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 ITGAVP06756 1048 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 ZNF286BP0CG31 522 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 ATP5DP30049 168 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 MNAT1P51948 309 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 PTPN11Q06124 597 aaPredicted RBP17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 ANKMY2Q8IV38 441 aa17.67■□□□□ 0.42
SEMA3B-213ENST00000618865 ZBED8Q8IZ13 594 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms