RNA–Protein interactions for RNA: ENST00000618836.4

UBE2D3-233, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 3,472 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-233ENST00000618836 CCNYL3P0C7X3 344 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 MYL4P12829 197 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 RFC2P35250 354 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 HSPA13P48723 471 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 GNAQP50148 359 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SERPINB8P50452 374 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 DRG2P55039 364 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 HUNKP57058 714 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 MAP3K7CLP57077 242 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 TEX35Q5T0J7 233 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SHEQ5VZ18 495 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 DESI1Q6ICB0 168 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 IL27RAQ6UWB1 636 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 CATSPERGQ6ZRH7 1159 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 NLRC3Q7RTR2 1065 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ADGRG2Q8IZP9 1017 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ANKRD52Q8NB46 1076 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ZNF680Q8NEM1 530 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 WASF1Q92558 559 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ABHD17AQ96GS6 310 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SUCLG2Q96I99 432 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 LRCH3Q96II8 777 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 EXOC2Q96KP1 924 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 CEP19Q96LK0 163 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ATP6V0BQ99437 205 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 IFIH1Q9BYX4 1025 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 TPK1Q9H3S4 243 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SEMA6BQ9H3T3 888 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 WASH6PQ9NQA3 447 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 CCDC177Q9NQR7 707 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 C8orf4Q9NR00 106 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 MIS18AQ9NYP9 233 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SENP1Q9P0U3 644 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 GMIPQ9P107 970 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 CD300AQ9UGN4 299 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 GGT7Q9UJ14 662 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 GOLGA8BA8MQT2 603 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 F8W810 466 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 H0YIN7 160 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 H3BRJ5 948 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 MEN1O00255 615 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 FKBP9O95302 570 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 PABPC4LP0CB38 370 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 DDX5P17844 614 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 M6PRP20645 277 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 GTF2IP78347 998 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 GALNT1Q10472 559 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SMARCB1Q12824 385 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 TLR1Q15399 786 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ALX1Q15699 326 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 LONRF2Q1L5Z9 754 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ZNF658Q5TYW1 1059 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 FBXW10Q5XX13 1052 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 PAPD4Q6PIY7 484 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 TXNRD3Q86VQ6 643 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 CDH26Q8IXH8 852 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 CARFQ8N187 725 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 MRPL50Q8N5N7 158 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ANKS4BQ8N8V4 417 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 DNAAF3Q8N9W5 541 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 NSUN7Q8NE18 718 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ZNF461Q8TAF7 563 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ZSCAN18Q8TBC5 510 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 ATL1Q8WXF7 558 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SEPT1Q8WYJ6 367 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SLC9A6Q92581 669 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SLC22A18Q96BI1 424 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 XAGE2Q96GT9 111 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SPSB2Q99619 263 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 PIP5K1AQ99755 562 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 GBA3Q9H227 469 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SCUBE2Q9NQ36 999 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 KCND1Q9NSA2 647 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 IFT80Q9P2H3 777 aaPredicted RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 FCF1Q9Y324 198 aaKnown RBP4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 PARP3Q9Y6F1 533 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 TLL2Q9Y6L7 1015 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 PTPRCP08575 1304 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 PIK3C2GO75747 1445 aa4.31□□□□□ -1.72
UBE2D3-233ENST00000618836 SOWAHBA6NEL2 793 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 LRRIQ3A6PVS8 624 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 TMEM229AB2RXF0 380 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 SERPINF2P08697 491 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 FUT4P22083 530 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 HMGB2P26583 209 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 MC4RP32245 332 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 HDGFP51858 240 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 GPX6P59796 221 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 GTF2H3Q13889 308 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 PTK2BQ14289 1009 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 PTPRNQ16849 979 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 RGS21Q2M5E4 152 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 SYDE2Q5VT97 1194 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 RNF219Q5W0B1 726 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 CCDC102BQ68D86 513 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 METTL2BQ6P1Q9 378 aaKnown RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 LMBR1LQ6UX01 489 aa4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 SYDE1Q6ZW31 735 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 PDZD4Q76G19 769 aaPredicted RBP4.3□□□□□ -1.72
UBE2D3-233ENST00000618836 PTF1AQ7RTS3 328 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms