RNA–Protein interactions for RNA: ENST00000618606.1

TARDBP-220, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-220ENST00000618606 C8orf58Q8NAV2 365 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 ADAMTS15Q8TE58 950 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 SLC13A1Q9BZW2 595 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 SPRTNQ9H040 489 aaPredicted RBP3.84□□□□□ -1.79
TARDBP-220ENST00000618606 SLAMF7Q9NQ25 335 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 SSX2IPQ9Y2D8 614 aa3.84□□□□□ -1.79
TARDBP-220ENST00000618606 CYSRT1A8MQ03 144 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 ZNF134P52741 427 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 CYP4F2P78329 520 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 SP2Q02086 613 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 TREML2Q5T2D2 321 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 THEMIS2Q5TEJ8 643 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 KRTAP5-1Q6L8H4 278 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 SLC2A7Q6PXP3 512 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 DLK2Q6UY11 383 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 PARS2Q7L3T8 475 aaKnown RBP3.83□□□□□ -1.8
TARDBP-220ENST00000618606 SMRP1Q8NCR6 262 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 RP9Q8TA86 221 aaKnown RBP3.83□□□□□ -1.8
TARDBP-220ENST00000618606 TNPO1Q92973 898 aaKnown RBP3.83□□□□□ -1.8
TARDBP-220ENST00000618606 ASB2Q96Q27 587 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 FSD1LQ9BXM9 530 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 CCDC8Q9H0W5 538 aaPredicted RBP3.83□□□□□ -1.8
TARDBP-220ENST00000618606 EBF3Q9H4W6 596 aa3.83□□□□□ -1.8
TARDBP-220ENST00000618606 TUBA8Q9NY65 449 aaPredicted RBP3.83□□□□□ -1.8
TARDBP-220ENST00000618606 CCDC187A0A096LP49 1063 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 DCLK1O15075 740 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 ZRANB2O95218 330 aaKnown RBP eCLIP3.82□□□□□ -1.8
TARDBP-220ENST00000618606 GNAI2P04899 355 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 PDCP20941 246 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 MMP13P45452 471 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 GUCY2FP51841 1108 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 ITKQ08881 620 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 NOGQ13253 232 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 TRIP6Q15654 476 aaKnown RBP3.82□□□□□ -1.8
TARDBP-220ENST00000618606 HEATR3Q7Z4Q2 680 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 PPP1R3BQ86XI6 285 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 FAM46DQ8NEK8 389 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 SLC46A1Q96NT5 459 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 PTDSS2Q9BVG9 487 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 VPS16Q9H269 839 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.82□□□□□ -1.8
TARDBP-220ENST00000618606 HESX1Q9UBX0 185 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 ABCF2Q9UG63 623 aa3.82□□□□□ -1.8
TARDBP-220ENST00000618606 TNKSO95271 1327 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 IGKV2D-30A0A075B6S6 120 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 KCNU1A8MYU2 1149 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 M0QYG6 137 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 TJP3O95049 919 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 ATXN1LP0C7T5 689 aaKnown RBP3.81□□□□□ -1.8
TARDBP-220ENST00000618606 PIM1P11309 404 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-220ENST00000618606 ENGP17813 658 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 PPIFP30405 207 aaKnown RBP3.81□□□□□ -1.8
TARDBP-220ENST00000618606 CLCN2P51788 898 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 LONRF3Q496Y0 759 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 NAPRTQ6XQN6 538 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 PNMA8AQ86V59 439 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-220ENST00000618606 MIER2Q8N344 545 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 CPA6Q8N4T0 437 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 PNLDC1Q8NA58 520 aaKnown RBP3.81□□□□□ -1.8
TARDBP-220ENST00000618606 C5orf34Q96MH7 638 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 CAMKK2Q96RR4 588 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 MACROD1Q9BQ69 325 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 THAP7Q9BT49 309 aaPredicted RBP3.81□□□□□ -1.8
TARDBP-220ENST00000618606 SPC25Q9HBM1 224 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 USP35Q9P2H5 1018 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 ADAMTS5Q9UNA0 930 aa3.81□□□□□ -1.8
TARDBP-220ENST00000618606 WDR17Q8IZU2 1322 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 A1L4Q6 167 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 H7C1Q1 480 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 ERC2O15083 957 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 BCAR3O75815 825 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 AHSGP02765 367 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 FESP07332 822 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 TYRP14679 529 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 CDK11BP21127 795 aaKnown RBP3.8□□□□□ -1.8
TARDBP-220ENST00000618606 PLCD1P51178 756 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 LOXL3P58215 753 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 TBC1D25Q3MII6 688 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 EMC10Q5UCC4 262 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 TRIM72Q6ZMU5 477 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 CYP2W1Q8TAV3 490 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 ATG4AQ8WYN0 398 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 RITA1Q96K30 269 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 FAM167AQ96KS9 214 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 PUS7Q96PZ0 661 aaKnown RBP3.8□□□□□ -1.8
TARDBP-220ENST00000618606 PNPOQ9NVS9 261 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 SERTAD3Q9UJW9 196 aa3.8□□□□□ -1.8
TARDBP-220ENST00000618606 MYMKA6NI61 221 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 POC1B-GALNT4F8VUJ3 575 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 KATNA1O75449 491 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 NPSP0C0P6 89 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 PXNP49023 591 aaPredicted RBP3.79□□□□□ -1.8
TARDBP-220ENST00000618606 MAP2K6P52564 334 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 PDE1AP54750 535 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 IQCB1Q15051 598 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 RABEP1Q15276 862 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 PTPN21Q16825 1174 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 AMOTQ4VCS5 1084 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 PXDC1Q5TGL8 231 aa3.79□□□□□ -1.8
TARDBP-220ENST00000618606 KIAA1161Q6NSJ0 714 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms