RNA–Protein interactions for RNA: ENST00000618516.4

SYCP1-210, Transcript of synaptonemal complex protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYCP1, Length 3,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-210ENST00000618516 LRRC63Q05C16 580 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 VEPH1Q14D04 833 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 ZBTB6Q15916 424 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 DUSP6Q16828 381 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 KLHL40Q2TBA0 621 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 PPP1R26Q5T8A7 1209 aaPredicted RBP4.9□□□□□ -1.62
SYCP1-210ENST00000618516 CYP4A22Q5TCH4 519 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.9□□□□□ -1.62
SYCP1-210ENST00000618516 DNAJB7Q7Z6W7 309 aaPredicted RBP4.9□□□□□ -1.62
SYCP1-210ENST00000618516 IRF2BP1Q8IU81 584 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 GJD3Q8N144 294 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 B3GALNT2Q8NCR0 500 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 ANKRD20A12PQ8NF67 263 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 SLC30A5Q8TAD4 765 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 KBTBD7Q8WVZ9 684 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 FGF13Q92913 245 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 HVCN1Q96D96 273 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 PABPC5Q96DU9 382 aaKnown RBP4.9□□□□□ -1.62
SYCP1-210ENST00000618516 SLC22A12Q96S37 553 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 RTP3Q9BQQ7 232 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 TRAIPQ9BWF2 469 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 TRIM5Q9C035 493 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 INTS2Q9H0H0 1204 aaKnown RBP4.9□□□□□ -1.62
SYCP1-210ENST00000618516 NDST4Q9H3R1 872 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 ST6GALNAC4Q9H4F1 302 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 KIAA1586Q9HCI6 787 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 ASAH2Q9NR71 780 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 POLR3BQ9NW08 1133 aaPredicted RBP4.9□□□□□ -1.62
SYCP1-210ENST00000618516 IFNKQ9P0W0 207 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 DNMT3BQ9UBC3 853 aaKnown RBP4.9□□□□□ -1.62
SYCP1-210ENST00000618516 TJP2Q9UDY2 1190 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 ITGA11Q9UKX5 1188 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 INSL5Q9Y5Q6 135 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 FHOD1Q9Y613 1164 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 TECTAO75443 2155 aa4.9□□□□□ -1.62
SYCP1-210ENST00000618516 FNDC1Q4ZHG4 1894 aaPredicted RBP4.9□□□□□ -1.62
SYCP1-210ENST00000618516 FAM237AA0A1B0GTK4 181 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 C2orf78A6NCI8 922 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 DPYSL4O14531 572 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 USP17L7P0C7H9 530 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 SRGAP2BP0DMP2 458 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 SKILP12757 684 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 ATF2P15336 505 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 CEBPBP17676 345 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 PTPN1P18031 435 aaKnown RBP4.9□□□□□ -1.63
SYCP1-210ENST00000618516 ANXA13P27216 316 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 GTF2H1P32780 548 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 AAK1Q2M2I8 961 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 SGSM1Q2NKQ1 1148 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 TDRD12Q587J7 1177 aaKnown RBP4.9□□□□□ -1.63
SYCP1-210ENST00000618516 GPR158Q5T848 1215 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 NAIF1Q69YI7 327 aaPredicted RBP4.9□□□□□ -1.63
SYCP1-210ENST00000618516 PHLDB3Q6NSJ2 640 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 GPRIN1Q7Z2K8 1008 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 NAT16Q8N8M0 369 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 ARL14EPQ8N8R7 260 aaPredicted RBP4.9□□□□□ -1.63
SYCP1-210ENST00000618516 PIK3R5Q8WYR1 880 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 FGF14Q92915 247 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 MFSD14AQ96MC6 490 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 NAP1L5Q96NT1 182 aaPredicted RBP4.9□□□□□ -1.63
SYCP1-210ENST00000618516 ASB2Q96Q27 587 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 MYADMQ96S97 322 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 TMEM175Q9BSA9 504 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.9□□□□□ -1.63
SYCP1-210ENST00000618516 ELOVL4Q9GZR5 314 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 NIF3L1Q9GZT8 377 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 NAT10Q9H0A0 1025 aaKnown RBP4.9□□□□□ -1.63
SYCP1-210ENST00000618516 XYLT2Q9H1B5 865 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 MFSD1Q9H3U5 465 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 TMEM8AQ9HCN3 771 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 GKN1Q9NS71 199 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 CHST7Q9NS84 486 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 GTSE1Q9NYZ3 720 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 DACH1Q9UI36 760 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 RWDD2AQ9UIY3 292 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 NAGPAQ9UK23 515 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 CCL26Q9Y258 94 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 STYXL1Q9Y6J8 313 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 MYH15Q9Y2K3 1946 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 C5orf67F2Z3F1 127 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 RNF225M0QZC1 329 aaPredicted RBP4.9□□□□□ -1.63
SYCP1-210ENST00000618516 MBTPS2O43462 519 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 BNIP3LO60238 219 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 ATF6P18850 670 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 FGFR3P22607 806 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 PCSK1P29120 753 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 AVPR1AP37288 418 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 DNA2P51530 1060 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 EPHB3P54753 998 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 TAF10Q12962 218 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 ADAM15Q13444 863 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 CDO1Q16878 200 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 BMT2Q1RMZ1 405 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 TCP11X2Q5H9J9 407 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 FKBP15Q5T1M5 1219 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 ANKRD54Q6NXT1 300 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 PARM1Q6UWI2 310 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 TPGS1Q6ZTW0 290 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 SLC47A2Q86VL8 602 aa4.9□□□□□ -1.63
SYCP1-210ENST00000618516 SCUBE3Q8IX30 993 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms