RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 STX7O15400 261 aaKnown RBP11.44□□□□□ -0.58
POLR2A-209ENST00000617998 HSPA8P11142 646 aaKnown RBP11.44□□□□□ -0.58
POLR2A-209ENST00000617998 TNNI3P19429 210 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 BDNFP23560 247 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 EPHB2P29323 1055 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 RPIAP49247 311 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 MAP3K10Q02779 954 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 DNAJC21Q5F1R6 531 aaKnown RBP11.44□□□□□ -0.58
POLR2A-209ENST00000617998 WDR45BQ5MNZ6 344 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 FAXCQ5TGI0 409 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 PDE12Q6L8Q7 609 aaKnown RBP11.44□□□□□ -0.58
POLR2A-209ENST00000617998 C11orf96Q7Z7L8 435 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 TTC13Q8NBP0 860 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 MCOLN3Q8TDD5 553 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 HMGB4Q8WW32 186 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 CFAP36Q96G28 342 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.44□□□□□ -0.58
POLR2A-209ENST00000617998 ZNF510Q9Y2H8 683 aa11.44□□□□□ -0.58
POLR2A-209ENST00000617998 IGF2BP3O00425 579 aaKnown RBP eCLIP11.43□□□□□ -0.588e-6■■■□□ 17.7
POLR2A-209ENST00000617998 H2AFYO75367 372 aaKnown RBP11.43□□□□□ -0.58
POLR2A-209ENST00000617998 KLHL40Q2TBA0 621 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 OR8D1Q8WZ84 308 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 IRF7Q92985 503 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 ZCCHC2Q9C0B9 1178 aaKnown RBP11.43□□□□□ -0.58
POLR2A-209ENST00000617998 ARHGAP39Q9C0H5 1083 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 CCDC151A5D8V7 595 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 SCAMP3O14828 347 aaKnown RBP11.43□□□□□ -0.58
POLR2A-209ENST00000617998 DEPDC1BQ8WUY9 529 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 CAPN10Q9HC96 672 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 PARVAQ9NVD7 372 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 RBPJLQ9UBG7 517 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 APOL1O14791 398 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 TAC1P20366 129 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 TRIM67Q6ZTA4 783 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 GUF1Q8N442 669 aaKnown RBP11.43□□□□□ -0.58
POLR2A-209ENST00000617998 ABCC6O95255 1503 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 NPTX2P47972 431 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 POLR2LP62875 67 aaKnown RBP11.43□□□□□ -0.58
POLR2A-209ENST00000617998 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
POLR2A-209ENST00000617998 DAB2IPQ5VWQ8 1189 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 NDST4Q9H3R1 872 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 RAD18Q9NS91 495 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 DYNC1I1O14576 645 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 PSMD3O43242 534 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 PEX10O60683 326 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 GRIK5Q16478 980 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 LGI2Q8N0V4 545 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 ADGRA2Q96PE1 1338 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 KPNA7A9QM74 516 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 BUB1BO60566 1050 aaPredicted RBP11.43□□□□□ -0.58
POLR2A-209ENST00000617998 KELP23276 732 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 KRT20P35900 424 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 TKTL1P51854 596 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 XRCC4Q13426 336 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 PPHLN1Q8NEY8 458 aaKnown RBP11.43□□□□□ -0.58
POLR2A-209ENST00000617998 RUNDC3BQ96NL0 473 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 PURBQ96QR8 312 aaKnown RBP11.43□□□□□ -0.58
POLR2A-209ENST00000617998 KIAA1257Q9ULG3 409 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 FIS1Q9Y3D6 152 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 GPSM3Q9Y4H4 160 aa11.43□□□□□ -0.58
POLR2A-209ENST00000617998 LIG3P49916 1009 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 SCNN1BP51168 640 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 MRPS5P82675 430 aaKnown RBP11.42□□□□□ -0.58
POLR2A-209ENST00000617998 SMARCB1Q12824 385 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 TUSC3Q13454 348 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 PPP1R2P1Q96PQ5 205 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 THAP9Q9H5L6 903 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 BFARQ9NZS9 450 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 CNTNAP1P78357 1384 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 NEDD8-MDP1E9PL57 170 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 PDXKO00764 312 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 PPP3CCP48454 512 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 ZC2HC1CQ53FD0 456 aaPredicted RBP11.42□□□□□ -0.58
POLR2A-209ENST00000617998 ZNF618Q5T7W0 954 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 ADGRA1Q86SQ6 560 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 TMEM192Q8IY95 271 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 E2F7Q96AV8 911 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 SUN2Q9UH99 717 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 DDX41Q9UJV9 622 aaKnown RBP11.42□□□□□ -0.58
POLR2A-209ENST00000617998 MAN2B1O00754 1011 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 CXorf40BQ96DE9 158 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 NAPGQ99747 312 aaPredicted RBP11.42□□□□□ -0.58
POLR2A-209ENST00000617998 ATP13A1Q9HD20 1204 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 RSPH14Q9UHP6 348 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 RWDD2AQ9UIY3 292 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 NPY2RP49146 381 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 RENBPP51606 427 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 RHBDL3P58872 404 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 SKP1P63208 163 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 FUT10Q6P4F1 479 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 MOXD1Q6UVY6 613 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 RAPGEF5Q92565 580 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 ZDHHC6Q9H6R6 413 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 AIPL1Q9NZN9 384 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 H3BQ06 376 aaPredicted RBP11.42□□□□□ -0.58
POLR2A-209ENST00000617998 OCM2P0CE71 109 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 OCMP0CE72 109 aaPredicted RBP11.42□□□□□ -0.58
POLR2A-209ENST00000617998 MYBL1P10243 752 aa11.42□□□□□ -0.58
POLR2A-209ENST00000617998 CAMK2GQ13555 558 aaPredicted RBP11.42□□□□□ -0.58
POLR2A-209ENST00000617998 ZNF576Q9H609 170 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms