RNA–Protein interactions for RNA: ENST00000617310.4

SMARCA1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

TSL 2

Gene SMARCA1, Length 4,291 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-205ENST00000617310 CAPSQ13938 189 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 ANO5Q75V66 913 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 CCDC197Q8NCU1 140 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 TTC8Q8TAM2 541 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 CELF6Q96J87 481 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 UBP1Q9NZI7 540 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 ARHGAP20Q9P2F6 1191 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 SNCAIPQ9Y6H5 919 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 SLC30A1Q9Y6M5 507 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 NALCNQ8IZF0 1738 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 SYF2O95926 243 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 MCF2P10911 925 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 ARHGAP25P42331 645 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 PPP3CAQ08209 521 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 ADCY2Q08462 1091 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 C6orf118Q5T5N4 469 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 CD302Q8IX05 232 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 TMC2Q8TDI7 906 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 SCG3Q8WXD2 468 aaKnown RBP10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 COL20A1Q9P218 1284 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 NRCAMQ92823 1304 aa10.6□□□□□ -0.71
SMARCA1-205ENST00000617310 TSPAN3O60637 253 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 NFICP08651 508 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 CYP3A4P08684 503 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 RASSF2P50749 326 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 TTC31Q49AM3 519 aaPredicted RBP10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 BRSK2Q8IWQ3 736 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 OR2W6PQ8NHA6 318 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.59□□□□□ -0.714e-22■□□□□ 10.7
SMARCA1-205ENST00000617310 SENP8Q96LD8 212 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ZC3H7BQ9UGR2 993 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 KPNA7A9QM74 516 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 FOXP2O15409 715 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 CCNE2O96020 404 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 KYNUQ16719 465 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 SLC39A12Q504Y0 691 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ARHGAP15Q53QZ3 475 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 WSCD1Q658N2 575 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ADCK2Q7Z695 626 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 RASSF3Q86WH2 238 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ZNF507Q8TCN5 953 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 HELQQ8TDG4 1101 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 GPR63Q9BZJ6 419 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ATXN3LQ9H3M9 355 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 PPARGC1AQ9UBK2 798 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 NR2E3Q9Y5X4 410 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 MRFAP1Q9Y605 127 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 PIK3C2AO00443 1686 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ESRRBO95718 433 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 CCDC130P13994 396 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 HADHAP40939 763 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 SLC11A2P49281 568 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 FUT2Q10981 343 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ZNF177Q13360 481 aaPredicted RBP10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 IKBKEQ14164 716 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 IL17AQ16552 155 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 BTNL9Q6UXG8 535 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ZPBP2Q6X784 338 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 CARNMT1Q8N4J0 409 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 MORC4Q8TE76 937 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 KAT2BQ92831 832 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 PPWD1Q96BP3 646 aaKnown RBP10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 DCUN1D1Q96GG9 259 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 ST3GAL5Q9UNP4 418 aa10.59□□□□□ -0.71
SMARCA1-205ENST00000617310 AP5Z1O43299 807 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 AOC2O75106 756 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 NPM3O75607 178 aaKnown RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 ASS1P00966 412 aaKnown RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 ERFP50548 548 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 EIF3BP55884 814 aaKnown RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 RPL10AP62906 217 aaKnown RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 ARHGEF7Q14155 803 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 KIF19Q2TAC6 998 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 BOLA3Q53S33 107 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 MAP4K3Q8IVH8 894 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 C4orf33Q8N1A6 199 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 BLOC1S5Q8TDH9 187 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 ZNF669Q96BR6 464 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 CDT1Q9H211 546 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 TSPYL2Q9H2G4 693 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 NFASCO94856 1347 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 PPFIA2O75334 1257 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 CHEK2O96017 543 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 SERPIND1P05546 499 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 GLE1Q53GS7 698 aaKnown RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 SDHAF4Q5VUM1 108 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 OTOP2Q7RTS6 562 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 ZNF467Q7Z7K2 595 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 HS6ST3Q8IZP7 471 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 INPP4AQ96PE3 977 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 PITPNM3Q9BZ71 974 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 XPO7Q9UIA9 1087 aaKnown RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 INTUQ9ULD6 942 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 LRRIQ3A6PVS8 624 aaPredicted RBP10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 SPATA31C2B4DYI2 1134 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 CBX4O00257 560 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 RAD51CO43502 376 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 GFAPP14136 432 aa10.58□□□□□ -0.72
SMARCA1-205ENST00000617310 COPS2P61201 443 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms