RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 C7orf26Q96N11 449 aa16.33■□□□□ 0.21
GPN1-212ENST00000616939 CYTH2Q99418 400 aa16.33■□□□□ 0.21
GPN1-212ENST00000616939 KCNH7Q9NS40 1196 aa16.33■□□□□ 0.21
GPN1-212ENST00000616939 TBC1D22BQ9NU19 505 aa16.33■□□□□ 0.21
GPN1-212ENST00000616939 PLA2G4CQ9UP65 541 aa16.33■□□□□ 0.21
GPN1-212ENST00000616939 TMX2Q9Y320 296 aa16.33■□□□□ 0.21
GPN1-212ENST00000616939 DDX39AO00148 427 aaKnown RBP16.33■□□□□ 0.2
GPN1-212ENST00000616939 FKBP6O75344 327 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 CSDE1O75534 798 aaKnown RBP16.33■□□□□ 0.2
GPN1-212ENST00000616939 TM7SF2O76062 418 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 CALB1P05937 261 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 ATF7P17544 494 aaPredicted RBP16.33■□□□□ 0.2
GPN1-212ENST00000616939 BRD2P25440 801 aaKnown RBP16.33■□□□□ 0.2
GPN1-212ENST00000616939 CDKN2BP42772 138 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 SSR1P43307 286 aaKnown RBP16.33■□□□□ 0.2
GPN1-212ENST00000616939 SERPINB4P48594 390 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 ACTR3P61158 418 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 AP2B1P63010 937 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 JAG1P78504 1218 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 DSG1Q02413 1049 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 LAMB3Q13751 1172 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 AAGABQ6PD74 315 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 CAPN12Q6ZSI9 719 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 PHLDB2Q86SQ0 1253 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 ANKMY2Q8IV38 441 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.33■□□□□ 0.2
GPN1-212ENST00000616939 RAB3IL1Q8TBN0 382 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 PRR11Q96HE9 360 aaPredicted RBP16.33■□□□□ 0.2
GPN1-212ENST00000616939 ECSITQ9BQ95 431 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 FBXO6Q9NRD1 293 aaPredicted RBP16.33■□□□□ 0.2
GPN1-212ENST00000616939 MKS1Q9NXB0 559 aa16.33■□□□□ 0.2
GPN1-212ENST00000616939 TCRBV5S1A1TA0A578 114 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 WDR91A4D1P6 747 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 PI4K2BG5E9Z4 385 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 HLA-DRAP01903 254 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 GYS1P13807 737 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 CDK7P50613 346 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 JAK3P52333 1124 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 PSMC5P62195 406 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 XIAPP98170 497 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 BRDTQ58F21 947 aaPredicted RBP16.32■□□□□ 0.2
GPN1-212ENST00000616939 KAZNQ674X7 775 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 FAM196AQ6ZSG2 479 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 POLNQ7Z5Q5 900 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 SCUBE1Q8IWY4 988 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 SLC44A1Q8WWI5 657 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 POMGNT1Q8WZA1 660 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 WDR83Q9BRX9 315 aaKnown RBP16.32■□□□□ 0.2
GPN1-212ENST00000616939 CENPKQ9BS16 269 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 PI4K2AQ9BTU6 479 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 C1orf21Q9H246 121 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 GPRC5CQ9NQ84 441 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 KMT5AQ9NQR1 393 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 NDE1Q9NXR1 346 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 ZNRF3Q9ULT6 936 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 WASF2Q9Y6W5 498 aa16.32■□□□□ 0.2
GPN1-212ENST00000616939 SGK1O00141 431 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 C4BPAP04003 597 aaKnown RBP16.31■□□□□ 0.2
GPN1-212ENST00000616939 MYL2P10916 166 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 MMP8P22894 467 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 AMPD1P23109 780 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 TBXAS1P24557 533 aaPredicted RBP16.31■□□□□ 0.2
GPN1-212ENST00000616939 GNA15P30679 374 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 SSTR1P30872 391 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 RTP1P59025 263 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 CUL2Q13617 745 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 PIGHQ14442 188 aaPredicted RBP16.31■□□□□ 0.2
GPN1-212ENST00000616939 TKFCQ3LXA3 575 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 HP1BP3Q5SSJ5 553 aaPredicted RBP16.31■□□□□ 0.2
GPN1-212ENST00000616939 FNBP1LQ5T0N5 605 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 FAM102BQ5T8I3 360 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 C3orf62Q6ZUJ4 267 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 ACAD11Q709F0 780 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 STKLD1Q8NE28 680 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 FBXO36Q8NEA4 188 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 RDM1Q8NG50 284 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 DTX3LQ8TDB6 740 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 ZNF516Q92618 1163 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 KCNN1Q92952 543 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 FAM161BQ96MY7 647 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 FAM210AQ96ND0 272 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 HAPLN3Q96S86 360 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 SPATA16Q9BXB7 569 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 PPP1R12CQ9BZL4 782 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 DNAJC5Q9H3Z4 198 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 PNPLA8Q9NP80 782 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 METTL5Q9NRN9 209 aaKnown RBP16.31■□□□□ 0.2
GPN1-212ENST00000616939 PCMTD2Q9NV79 361 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 TAGLN3Q9UI15 199 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 COMMD3-BMI1R4GMX3 469 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 SPECC1L-ADORA2AF8WAN1 911 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 H0YCG3 227 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 EXTL3O43909 919 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 LSM8O95777 96 aaKnown RBP16.31■□□□□ 0.2
GPN1-212ENST00000616939 GSTT1P30711 240 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 CACNB3P54284 484 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 ZNF252P-AS1Q0IIN9 211 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 SPP2Q13103 211 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 TAZQ16635 292 aa16.31■□□□□ 0.2
GPN1-212ENST00000616939 FAM98CQ17RN3 349 aaKnown RBP16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms