RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 VN1R3Q9BXE9 311 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 DUSP16Q9BY84 665 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 ISCUQ9H1K1 167 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 KCNF1Q9H3M0 494 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 DPEP3Q9H4B8 488 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 SLC28A3Q9HAS3 691 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 PNPLA8Q9NP80 782 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 SEPT11Q9NVA2 429 aaKnown RBP12.35□□□□□ -0.43
TARDBP-217ENST00000616545 TSPAN16Q9UKR8 245 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 NENFQ9UMX5 172 aa12.35□□□□□ -0.43
TARDBP-217ENST00000616545 MYBPHLA2RUH7 354 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 GRXCR1A8MXD5 290 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 ZSCAN12O43309 604 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 LPXNO60711 386 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 LILRB3O75022 631 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 MICAL2O94851 1124 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 CCDC175P0C221 793 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 FAM200BP0CF97 657 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 MYBL1P10243 752 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 UNGP13051 313 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-217ENST00000616545 ACAT1P24752 427 aaKnown RBP12.34□□□□□ -0.43
TARDBP-217ENST00000616545 GPD2P43304 727 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 MAGEA11P43364 429 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 ACADSBP45954 432 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 NSFP46459 744 aaKnown RBP12.34□□□□□ -0.43
TARDBP-217ENST00000616545 NDUFV1P49821 464 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 PSMC1P62191 440 aaKnown RBP12.34□□□□□ -0.43
TARDBP-217ENST00000616545 RAB33AQ14088 237 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 SMC1AQ14683 1233 aaKnown RBP12.34□□□□□ -0.43
TARDBP-217ENST00000616545 LRIT3Q3SXY7 679 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 CCDC122Q5T0U0 273 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 TAF3Q5VWG9 929 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 FAM109BQ6ICB4 259 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-217ENST00000616545 ZNF662Q6ZS27 426 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 RTL10Q7L3V2 364 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 TAS1R1Q7RTX1 841 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 PHF13Q86YI8 300 aaPredicted RBP12.34□□□□□ -0.43
TARDBP-217ENST00000616545 FUKQ8N0W3 1084 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 C12orf29Q8N999 325 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 FBXO22Q8NEZ5 403 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 SLC2A14Q8TDB8 520 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 PCED1BQ96HM7 432 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 HSFY1Q96LI6 401 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 ZSWIM1Q9BR11 485 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 C17orf80Q9BSJ5 609 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 MED10Q9BTT4 135 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 EMILIN2Q9BXX0 1053 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 ACP6Q9NPH0 428 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 TLR9Q9NR96 1032 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 KCND1Q9NSA2 647 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 GTF3C4Q9UKN8 822 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 STRIP2Q9ULQ0 834 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 YBX2Q9Y2T7 364 aaKnown RBP12.34□□□□□ -0.43
TARDBP-217ENST00000616545 PCDHB5Q9Y5E4 795 aa12.34□□□□□ -0.43
TARDBP-217ENST00000616545 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.34□□□□□ -0.43
TARDBP-217ENST00000616545 TSC2P49815 1807 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 TMEM265A0A087WTH1 108 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 ANKRD62A6NC57 917 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 GOLGA6L9A6NEM1 432 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 M0QYV0 167 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 XPO1O14980 1071 aaKnown RBP12.33□□□□□ -0.44
TARDBP-217ENST00000616545 ATP2C2O75185 946 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 CALB1P05937 261 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 H2AFZP0C0S5 128 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 CPB1P15086 417 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 MYOGP15173 224 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 NPR3P17342 541 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 MAGEA1P43355 309 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 PLA2G4AP47712 749 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 RPL34P49207 117 aaKnown RBP12.33□□□□□ -0.44
TARDBP-217ENST00000616545 TUFMP49411 452 aaKnown RBP12.33□□□□□ -0.44
TARDBP-217ENST00000616545 NOMO3P69849 1222 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 CYP27A1Q02318 531 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 GFPT1Q06210 699 aaPredicted RBP12.33□□□□□ -0.44
TARDBP-217ENST00000616545 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
TARDBP-217ENST00000616545 ORC1Q13415 861 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 PTPN14Q15678 1187 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 GOLGA7BQ2TAP0 167 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 H2AFVQ71UI9 128 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 TMC7Q7Z402 723 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 FAM35AQ86V20 835 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 LRRTM3Q86VH5 581 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 ZDHHC17Q8IUH5 632 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 MRPL43Q8N983 215 aaKnown RBP12.33□□□□□ -0.44
TARDBP-217ENST00000616545 ZNF461Q8TAF7 563 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 OLIG1Q8TAK6 271 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 IPO4Q8TEX9 1081 aaKnown RBP12.33□□□□□ -0.44
TARDBP-217ENST00000616545 SLC35F5Q8WV83 523 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 POF1BQ8WVV4 589 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 KCTD13Q8WZ19 329 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 MYLPFQ96A32 169 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 PCDHB18PQ96TA0 734 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 B3GNT5Q9BYG0 378 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 TSGA10Q9BZW7 698 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 CSNK1G1Q9HCP0 422 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 FAM49BQ9NUQ9 324 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 WDR35Q9P2L0 1181 aa12.33□□□□□ -0.44
TARDBP-217ENST00000616545 AFF4Q9UHB7 1163 aaKnown RBP12.33□□□□□ -0.44
TARDBP-217ENST00000616545 PCDHA13Q9Y5I0 950 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms