RNA–Protein interactions for RNA: ENST00000616288.4

PPP4R3B-205, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PPP4R3B, Length 4,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-205ENST00000616288 CSPG5O95196 566 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 BFSP2Q13515 415 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 TFDP1Q14186 410 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 SFT2D3Q587I9 215 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 JADE1Q6IE81 842 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 C10orf82Q8WW14 230 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 SDCCAG3Q96C92 435 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 KRT82Q9NSB4 513 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 MAGED2Q9UNF1 606 aaPredicted RBP14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 NRKQ7Z2Y5 1582 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 MYH6P13533 1939 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 E9PBE3 544 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 TPTEP56180 551 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 TRIM25Q14258 630 aaKnown RBP14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 UBAP2Q5T6F2 1119 aaKnown RBP14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 DPY19L2Q6NUT2 758 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZBTB49Q6ZSB9 765 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 C14orf80Q86SX3 495 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 SLC20A1Q8WUM9 679 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 FAF2Q96CS3 445 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 TEKT2Q9UIF3 430 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 DNAJC16Q9Y2G8 782 aa14.13□□□□□ -0.15
PPP4R3B-205ENST00000616288 PDE8AO60658 829 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TRIM16O95361 564 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 HSPA8P11142 646 aaKnown RBP14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 CD19P15391 556 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 STAT3P40763 770 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 PKNOX1P55347 436 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 LRRC47Q8N1G4 583 aaKnown RBP14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 RASGEF1CQ8N431 466 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TGFBRAP1Q8WUH2 860 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 DHRS1Q96LJ7 313 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TSPAN18Q96SJ8 248 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TAS2R14Q9NYV8 317 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 GRHL1Q9NZI5 618 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 APEX2Q9UBZ4 518 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 PCYOX1Q9UHG3 505 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 SLC7A8Q9UHI5 535 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZMYM2Q9UBW7 1377 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TCRBV7S2A1N4TA0A589 114 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 FOXP2O15409 715 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 ARHGEF9O43307 516 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 VEGFAP15692 232 aaPredicted RBP14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TNNI1P19237 187 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 CSE1LP55060 971 aaKnown RBP14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TROAPQ12815 778 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TBCCQ15814 346 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 MXD3Q9BW11 206 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 SH3GLB2Q9NR46 395 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 C1orf112Q9NSG2 853 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 UVRAGQ9P2Y5 699 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 GNEQ9Y223 722 aaKnown RBP14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 NEURL4Q96JN8 1562 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZNF862O60290 1169 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 RRM1P23921 792 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 GRB10Q13322 594 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 EPC2Q52LR7 807 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 MROH9Q5TGP6 573 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TTC27Q6P3X3 843 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 LAYNQ6UX15 382 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 RHOT1Q8IXI2 618 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZSWIM2Q8NEG5 633 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 CDKL2Q92772 493 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 EYA3Q99504 573 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 TFCP2L1Q9NZI6 479 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 SLC17A7Q9P2U7 560 aa14.12□□□□□ -0.15
PPP4R3B-205ENST00000616288 USP17L8P0C7I0 530 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 NAT1P18440 290 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 IREB2P48200 963 aaKnown RBP14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 FMO5P49326 533 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 NDUFA5Q16718 116 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 METTL21CQ5VZV1 264 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 XKR5Q6UX68 686 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 ZNF398Q8TD17 642 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 FAM136AQ96C01 138 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 TMEM109Q9BVC6 243 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 TMEM59LQ9UK28 342 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 ACTL7BQ9Y614 415 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 ADGRB3O60242 1522 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 RBAK-RBAKDNI3L0D1 243 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 ENO2P09104 434 aaPredicted RBP14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 MYBP10242 640 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 BMP3P12645 472 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 SMARCA1P28370 1054 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 CCDC14Q49A88 953 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 FAAH2Q6GMR7 532 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 GET4Q7L5D6 327 aaPredicted RBP14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 HPS6Q86YV9 775 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 LRRC57Q8N9N7 239 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 TAMM41Q96BW9 452 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 CITED4Q96RK1 184 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 MIPEPQ99797 713 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 BARHL2Q9NY43 387 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 MROH5Q6ZUA9 1318 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 TM9SF1O15321 606 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 CASP2P42575 452 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 CD97P48960 835 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 C11orf63Q6NUN7 778 aa14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 PTAR1Q7Z6K3 402 aaPredicted RBP14.11□□□□□ -0.15
PPP4R3B-205ENST00000616288 NAP1L4Q99733 375 aaKnown RBP14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms