RNA–Protein interactions for RNA: ENST00000615843.4

SPAST-203, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-203ENST00000615843 PCNX4Q63HM2 1172 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 PDPK2PQ6A1A2 396 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 BBS2Q9BXC9 721 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 RPS6KA4O75676 772 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 MAP3K7CLP57077 242 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 SPDYCQ5MJ68 293 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 TMEM143Q96AN5 459 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 RMDN1Q96DB5 314 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.59■□□□□ 0.73
SPAST-203ENST00000615843 NARFQ9UHQ1 456 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 ZBTB49Q6ZSB9 765 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 C16orf86Q6ZW13 317 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 ZNF556Q9HAH1 456 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 SAR1AQ9NR31 198 aa19.59■□□□□ 0.73
SPAST-203ENST00000615843 H2AFYO75367 372 aaKnown RBP19.58■□□□□ 0.73
SPAST-203ENST00000615843 TSPY1Q01534 308 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 ZNF235Q14590 738 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 TFDP3Q5H9I0 405 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 SPDYAQ5MJ70 313 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 EIF1ADQ8N9N8 165 aaKnown RBP19.58■□□□□ 0.73
SPAST-203ENST00000615843 SGF29Q96ES7 293 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 TNIP3Q96KP6 325 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 NR1H4Q96RI1 486 aaPredicted RBP19.58■□□□□ 0.73
SPAST-203ENST00000615843 TMEM79Q9BSE2 394 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 RUSC1Q9BVN2 902 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 AHCYL1O43865 530 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 TNFAIP8O95379 198 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 CYP11B1P15538 503 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 XKR3Q5GH77 459 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 RRM2BQ7LG56 351 aa19.58■□□□□ 0.73
SPAST-203ENST00000615843 OXNAD1Q96HP4 312 aaPredicted RBP19.58■□□□□ 0.73
SPAST-203ENST00000615843 E9PBE3 544 aa19.58■□□□□ 0.72
SPAST-203ENST00000615843 EEF2KO00418 725 aaKnown RBP19.58■□□□□ 0.72
SPAST-203ENST00000615843 KLHL41O60662 606 aa19.58■□□□□ 0.72
SPAST-203ENST00000615843 ATP1A4Q13733 1029 aa19.58■□□□□ 0.72
SPAST-203ENST00000615843 KIZQ2M2Z5 673 aa19.58■□□□□ 0.72
SPAST-203ENST00000615843 SOX13Q9UN79 622 aa19.58■□□□□ 0.72
SPAST-203ENST00000615843 A0A0U1RQJ8 604 aa19.58■□□□□ 0.72
SPAST-203ENST00000615843 ADARP55265 1226 aaKnown RBP19.58■□□□□ 0.72
SPAST-203ENST00000615843 PTK2BQ14289 1009 aa19.58■□□□□ 0.72
SPAST-203ENST00000615843 NIF3L1Q9GZT8 377 aa19.58■□□□□ 0.72
SPAST-203ENST00000615843 ALKQ9UM73 1620 aa19.58■□□□□ 0.72
SPAST-203ENST00000615843 RNF17Q9BXT8 1623 aaKnown RBP19.57■□□□□ 0.72
SPAST-203ENST00000615843 SNX3O60493 162 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 STX19Q8N4C7 294 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 SHCBP1Q8NEM2 672 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 CALML6Q8TD86 181 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 GLMNQ92990 594 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 PAIP1Q9H074 479 aaKnown RBP19.57■□□□□ 0.72
SPAST-203ENST00000615843 FAM32AQ9Y421 112 aaKnown RBP19.57■□□□□ 0.72
SPAST-203ENST00000615843 POLRMTO00411 1230 aaKnown RBP19.57■□□□□ 0.72
SPAST-203ENST00000615843 OPLAHO14841 1288 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 RALBP11234 206 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 GRK2P25098 689 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 PTGER2P43116 358 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 KRR1Q13601 381 aaKnown RBP19.57■□□□□ 0.72
SPAST-203ENST00000615843 KYAT1Q16773 422 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 C2CD6Q53TS8 623 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 ZNF560Q96MR9 790 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 GJC2Q5T442 439 aaPredicted RBP19.57■□□□□ 0.72
SPAST-203ENST00000615843 SEL1L3Q68CR1 1132 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 TWF2Q6IBS0 349 aaKnown RBP19.57■□□□□ 0.72
SPAST-203ENST00000615843 KIAA1841Q6NSI8 718 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 SLC20A1Q8WUM9 679 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 MCM8Q9UJA3 840 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 EXTL3O43909 919 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 PLA2G4FQ68DD2 849 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 RBBP8Q99708 897 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 TMEM121Q9BTD3 319 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 SPON2Q9BUD6 331 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 GPBP1L1Q9HC44 474 aaPredicted RBP19.57■□□□□ 0.72
SPAST-203ENST00000615843 HOXC10Q9NYD6 342 aa19.57■□□□□ 0.72
SPAST-203ENST00000615843 PSMG1O95456 288 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 TPP2P29144 1249 aaPredicted RBP19.56■□□□□ 0.72
SPAST-203ENST00000615843 ZNF280CQ8ND82 737 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 EXD1Q8NHP7 514 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 RIC8BQ9NVN3 520 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 SUPT3HB4E1H0 165 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 NDUFB10O96000 172 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 MYBL2P10244 700 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 TNIP2Q8NFZ5 429 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 TCP10LQ8TDR4 215 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 NEUROG2Q9H2A3 272 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 NINJ2Q9NZG7 142 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 RPS6KL1Q9Y6S9 549 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 GPSM2P81274 684 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 RBP5P82980 135 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 ATPAF2Q8N5M1 289 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 SNX9Q9Y5X1 595 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 SMNDC1O75940 238 aaKnown RBP eCLIP19.56■□□□□ 0.72
SPAST-203ENST00000615843 PROSCO94903 275 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 MTFR1Q15390 333 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 TMEM161AQ9NX61 479 aa19.56■□□□□ 0.72
SPAST-203ENST00000615843 AKAP3O75969 853 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 RRM1P23921 792 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 GSTT1P30711 240 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 FDFT1P37268 417 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 CUL2Q13617 745 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 BOLA3Q53S33 107 aa19.55■□□□□ 0.72
SPAST-203ENST00000615843 ERMARDQ5T6L9 678 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms