RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 KCNT1Q5JUK3 1230 aa19.45■□□□□ 0.7
GABPB1-212ENST00000615671 TTC39BQ5VTQ0 682 aaPredicted RBP19.45■□□□□ 0.7
GABPB1-212ENST00000615671 TMEM8AQ9HCN3 771 aa19.45■□□□□ 0.7
GABPB1-212ENST00000615671 ZCCHC17Q9NP64 241 aaKnown RBP19.45■□□□□ 0.7
GABPB1-212ENST00000615671 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP19.45■□□□□ 0.7
GABPB1-212ENST00000615671 IGSF9BQ9UPX0 1349 aa19.45■□□□□ 0.7
GABPB1-212ENST00000615671 KIAA0391O15091 583 aaKnown RBP19.45■□□□□ 0.7
GABPB1-212ENST00000615671 GPC1P35052 558 aa19.45■□□□□ 0.7
GABPB1-212ENST00000615671 CPA2P48052 419 aa19.45■□□□□ 0.7
GABPB1-212ENST00000615671 NT5C2P49902 561 aa19.45■□□□□ 0.7
GABPB1-212ENST00000615671 RPS7P62081 194 aaKnown RBP19.45■□□□□ 0.7
GABPB1-212ENST00000615671 SPATA21Q7Z572 469 aa19.45■□□□□ 0.7
GABPB1-212ENST00000615671 OPTNQ96CV9 577 aa19.45■□□□□ 0.7
GABPB1-212ENST00000615671 FZD1Q9UP38 647 aa19.45■□□□□ 0.7
GABPB1-212ENST00000615671 SKAP2O75563 359 aaPredicted RBP19.44■□□□□ 0.7
GABPB1-212ENST00000615671 RASSF9O75901 435 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 CAMK2GQ13555 558 aaPredicted RBP19.44■□□□□ 0.7
GABPB1-212ENST00000615671 ASCC2Q9H1I8 757 aaPredicted RBP19.44■□□□□ 0.7
GABPB1-212ENST00000615671 AP3B1O00203 1094 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 TRIM16O95361 564 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 STK4Q13043 487 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 CHI3L2Q15782 390 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 TMC7Q7Z402 723 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 VPS28Q9UK41 221 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 ZCCHC11Q5TAX3 1644 aaKnown RBP19.44■□□□□ 0.7
GABPB1-212ENST00000615671 KRT8P05787 483 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 HHIPL2Q6UWX4 724 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 PAWRQ96IZ0 340 aaKnown RBP19.44■□□□□ 0.7
GABPB1-212ENST00000615671 NIF3L1Q9GZT8 377 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 PSMC3IPQ9P2W1 217 aaPredicted RBP19.44■□□□□ 0.7
GABPB1-212ENST00000615671 TUBE1Q9UJT0 475 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 ADAM21Q9UKJ8 722 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 CPSF4O95639 269 aaKnown RBP19.44■□□□□ 0.7
GABPB1-212ENST00000615671 SP100P23497 879 aaPredicted RBP19.44■□□□□ 0.7
GABPB1-212ENST00000615671 NEK2P51955 445 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 ADGRF2Q8IZF7 708 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 ACER1Q8TDN7 264 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 WDR24Q96S15 920 aa19.44■□□□□ 0.7
GABPB1-212ENST00000615671 VWA5AO00534 786 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 ITGA8P53708 1063 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 TEX9Q8N6V9 391 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 POP1Q99575 1024 aaKnown RBP19.43■□□□□ 0.7
GABPB1-212ENST00000615671 THTPAQ9BU02 230 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 APPL1Q9UKG1 709 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 C2orf81A6NN90 581 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 SOX10P56693 466 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 MAPRE1Q15691 268 aaKnown RBP19.43■□□□□ 0.7
GABPB1-212ENST00000615671 PPP1R13LQ8WUF5 828 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 MRFAP1Q9Y605 127 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 CCDC15Q0P6D6 951 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 DPYDQ12882 1025 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 APOL2Q9BQE5 337 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 RUSC1Q9BVN2 902 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 SLC12A8A0AV02 714 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 A8MX80 341 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 CBX4O00257 560 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 SPRP35270 261 aaPredicted RBP19.43■□□□□ 0.7
GABPB1-212ENST00000615671 GLRBP48167 497 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 GTF3C2Q8WUA4 911 aaPredicted RBP19.43■□□□□ 0.7
GABPB1-212ENST00000615671 PGLYRP2Q96PD5 576 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 TBX20Q9UMR3 447 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 LOC100653049A0A140TA62 436 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 KRT34O76011 436 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 PRIM2P49643 509 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 RCAN1P53805 252 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 STARD3Q14849 445 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 SLC18A3Q16572 532 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 GBA2Q9HCG7 927 aaPredicted RBP19.43■□□□□ 0.7
GABPB1-212ENST00000615671 CYP4F12Q9HCS2 524 aa19.43■□□□□ 0.7
GABPB1-212ENST00000615671 KRT78Q8N1N4 520 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 ZNF609O15014 1411 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 SPATA31A1Q5TZJ5 1347 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 UGP2Q16851 508 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 STYK1Q6J9G0 422 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 IGDCC4Q8TDY8 1250 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 PIF1Q9H611 641 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 RUVBL2Q9Y230 463 aaKnown RBP19.42■□□□□ 0.7
GABPB1-212ENST00000615671 KDM1AO60341 852 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 DMTNQ08495 405 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 PTK6Q13882 451 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 PRPF39Q86UA1 669 aaKnown RBP19.42■□□□□ 0.7
GABPB1-212ENST00000615671 SGMS1Q86VZ5 419 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 CALML6Q8TD86 181 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 MED8Q96G25 268 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 OSBPL8Q9BZF1 889 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 EPB41L4AQ9HCS5 686 aaPredicted RBP19.42■□□□□ 0.7
GABPB1-212ENST00000615671 CHUKO15111 745 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 FEZF2Q8TBJ5 459 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 SPACA7Q96KW9 195 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 PAK5Q9P286 719 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 TDRKHQ9Y2W6 561 aaKnown RBP19.42■□□□□ 0.7
GABPB1-212ENST00000615671 HPGDP15428 266 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 KLRC2P26717 231 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 NT5DC3Q86UY8 548 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 UCMAQ8WVF2 138 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 PRMT6Q96LA8 375 aaPredicted RBP19.42■□□□□ 0.7
GABPB1-212ENST00000615671 C7orf25Q9BPX7 421 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 IPPQ9Y573 584 aa19.42■□□□□ 0.7
GABPB1-212ENST00000615671 PHF20L1A8MW92 1017 aa19.41■□□□□ 0.7
GABPB1-212ENST00000615671 LAMB3Q13751 1172 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms