RNA–Protein interactions for RNA: ENST00000614931.1

PCDH9-205, Transcript of protocadherin 9, humanhuman

TSL 1 (best)

Gene PCDH9, Length 461 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9-205ENST00000614931 CDR1P51861 262 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 KIF11P52732 1056 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 PSMC1P62191 440 aaKnown RBP8.55□□□□□ -1.04
PCDH9-205ENST00000614931 YWHAEP62258 255 aaKnown RBP8.55□□□□□ -1.04
PCDH9-205ENST00000614931 ZP2Q05996 745 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 SMAD4Q13485 552 aaKnown RBP8.55□□□□□ -1.04
PCDH9-205ENST00000614931 KCNC3Q14003 757 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 SMAD2Q15796 467 aaKnown RBP8.55□□□□□ -1.04
PCDH9-205ENST00000614931 CLUL1Q15846 466 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 TMEM184AQ6ZMB5 413 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 ACOT1Q86TX2 421 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 RBM23Q86U06 439 aaKnown RBP8.55□□□□□ -1.04
PCDH9-205ENST00000614931 TMTC1Q8IUR5 882 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 GLYCTKQ8IVS8 523 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 ADHFE1Q8IWW8 467 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 GJD3Q8N144 294 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 C17orf53Q8N3J3 647 aaPredicted RBP8.55□□□□□ -1.04
PCDH9-205ENST00000614931 CCDC112Q8NEF3 446 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 OR6B3Q8NGW1 331 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 SLC30A5Q8TAD4 765 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 TMEM176AQ96HP8 235 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 IGSF21Q96ID5 467 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 AGPAT1Q99943 283 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 TCF25Q9BQ70 676 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 COLEC11Q9BWP8 271 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 EPHX3Q9H6B9 360 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 NGRNQ9NPE2 291 aaKnown RBP8.55□□□□□ -1.04
PCDH9-205ENST00000614931 CRTAC1Q9NQ79 661 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 ZNHIT6Q9NWK9 470 aaKnown RBP8.55□□□□□ -1.04
PCDH9-205ENST00000614931 TAS2R14Q9NYV8 317 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 TFR2Q9UP52 801 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 MYO7AQ13402 2215 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 BRWD1Q9NSI6 2320 aa8.55□□□□□ -1.04
PCDH9-205ENST00000614931 MTCL1Q9Y4B5 1905 aaKnown RBP8.54□□□□□ -1.04
PCDH9-205ENST00000614931 TTC28Q96AY4 2481 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 RCCD1A6NED2 376 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 USP27XA6NNY8 438 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 HIDE1A8MVS5 230 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 A8MXQ7 604 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 PI4K2BG5E9Z4 385 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 THAP12O43422 761 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 TADA2AO75478 443 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 NDUFA10O95299 355 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 LCA5LO95447 670 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 ALDH2P05091 517 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 PAEPP09466 180 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 FAM163BP0C2L3 166 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 CCDC130P13994 396 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 CD19P15391 556 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 FGFR3P22607 806 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 GNL1P36915 607 aaPredicted RBP8.54□□□□□ -1.04
PCDH9-205ENST00000614931 PDE6CP51160 858 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 RBM10P98175 930 aaKnown RBP8.54□□□□□ -1.04
PCDH9-205ENST00000614931 CDR2Q01850 454 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 CYP27A1Q02318 531 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 GFPT1Q06210 699 aaPredicted RBP8.54□□□□□ -1.04
PCDH9-205ENST00000614931 TSR1Q2NL82 804 aaKnown RBP8.54□□□□□ -1.04
PCDH9-205ENST00000614931 HS1BP3Q53T59 392 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 RTP2Q5QGT7 225 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 PLPP4Q5VZY2 271 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 OVOS1Q6IE37 1185 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 DENND1BQ6P3S1 775 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 PAQR9Q6ZVX9 377 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 DPH6Q7L8W6 267 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 DDX53Q86TM3 631 aaKnown RBP8.54□□□□□ -1.04
PCDH9-205ENST00000614931 UNC93AQ86WB7 457 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 TMEM86AQ8N2M4 240 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 MRPL43Q8N983 215 aaKnown RBP8.54□□□□□ -1.04
PCDH9-205ENST00000614931 C12orf29Q8N999 325 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 SMRP1Q8NCR6 262 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 VN1R2Q8NFZ6 395 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 OR10T2Q8NGX3 314 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 ZNF606Q8WXB4 792 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 PKMYT1Q99640 499 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 SYT15Q9BQS2 421 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 NT5C1AQ9BXI3 368 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 C1QTNF1Q9BXJ1 281 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 PACSIN1Q9BY11 444 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 SNX25Q9H3E2 840 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 FAM124BQ9H5Z6 455 aaPredicted RBP8.54□□□□□ -1.04
PCDH9-205ENST00000614931 ENTPD7Q9NQZ7 604 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 FAM49BQ9NUQ9 324 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 TMLHEQ9NVH6 421 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 DDX43Q9NXZ2 648 aaKnown RBP8.54□□□□□ -1.04
PCDH9-205ENST00000614931 ADAMTS1Q9UHI8 967 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 ADGRG1Q9Y653 693 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 MUC3AQ02505 3323 aa8.54□□□□□ -1.04
PCDH9-205ENST00000614931 SF3B1O75533 1304 aaKnown RBP eCLIP8.54□□□□□ -1.045e-6■■■■■ 139.6
PCDH9-205ENST00000614931 MYBPHLA2RUH7 354 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 C2orf71A6NGG8 1288 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 EIF3CLB5ME19 914 aaKnown RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 O00370 1275 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 CLDN5O00501 218 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 MICAL2O94851 1124 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 ABL1P00519 1130 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 CYP1A1P04798 512 aaPredicted RBP8.53□□□□□ -1.04
PCDH9-205ENST00000614931 OR4Q2P0C623 313 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 BPIFB4P59827 614 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 NOMO3P69849 1222 aa8.53□□□□□ -1.04
PCDH9-205ENST00000614931 MRPL58Q14197 206 aaKnown RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms