RNA–Protein interactions for RNA: ENST00000614488.4

SCAMP1-205, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,276 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-205ENST00000614488 FAM98AQ8NCA5 519 aaKnown RBP6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 NELL1Q92832 810 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 RFKQ969G6 155 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 UROC1Q96N76 676 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 TIMP4Q99727 224 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 MESP1Q9BRJ9 268 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 SMURF2Q9HAU4 748 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 OBP2AQ9NY56 170 aa6.26□□□□□ -1.41
SCAMP1-205ENST00000614488 CFAP69A5D8W1 941 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 ISM1B1AKI9 464 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 GCOM1H8Y6P7 765 aaPredicted RBP6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 TBX3O15119 743 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 TBC1D4O60343 1298 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 TLR5O60602 858 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 ATF3P18847 181 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 SOX10P56693 466 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 SLC13A2Q13183 592 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 BMPR2Q13873 1038 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 GRM3Q14832 879 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 SLC44A4Q53GD3 710 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 ZNF362Q5T0B9 420 aaPredicted RBP6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 ZNF618Q5T7W0 954 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 R3HDMLQ9H3Y0 253 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 SERHLQ9NQF3 203 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 SEMA4GQ9NTN9 838 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 COX11Q9Y6N1 276 aa6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 COL11A2P13942 1736 aaPredicted RBP6.25□□□□□ -1.41
SCAMP1-205ENST00000614488 LINC00473A8K010 186 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 TPP1O14773 563 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 PPM1DO15297 605 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 SLC16A3O15427 465 aaKnown RBP6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 ZFXP17010 805 aaPredicted RBP6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 WT1P19544 449 aaPredicted RBP6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 FAM193AP78312 1265 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 CTBP1Q13363 440 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 E2F2Q14209 437 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 POLD3Q15054 466 aaPredicted RBP6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 LLGL1Q15334 1064 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 TBCCQ15814 346 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 PLAC9Q5JTB6 97 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 ARHGAP40Q5TG30 622 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 FBXO42Q6P3S6 717 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 C14orf80Q86SX3 495 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 FMNL3Q8IVF7 1028 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 SLC15A4Q8N697 577 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 BOLLQ8N9W6 283 aaKnown RBP6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 LRTOMTQ8WZ04 291 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 BBC3Q96PG8 261 aaPredicted RBP6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 ZNF518BQ9C0D4 1074 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 TPCN1Q9ULQ1 816 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 SH2B3Q9UQQ2 575 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 SSX2IPQ9Y2D8 614 aa6.24□□□□□ -1.41
SCAMP1-205ENST00000614488 KAT6AQ92794 2004 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 TTLL1O95922 423 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 ELFN1P0C7U0 828 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 PCSK6P29122 969 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 MGAT5BQ3V5L5 792 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 RNF220Q5VTB9 566 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 RGS7BPQ6MZT1 257 aaPredicted RBP6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 DARS2Q6PI48 645 aaKnown RBP6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 CCDC149Q6ZUS6 474 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 ZNF551Q7Z340 670 aaPredicted RBP6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 RD3Q7Z3Z2 195 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 WDR75Q8IWA0 830 aaKnown RBP6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 FAM156AQ8NDB6 213 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 MAML1Q92585 1016 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 LRRC27Q9C0I9 530 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 KLK15Q9H2R5 256 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 SERTAD3Q9UJW9 196 aa6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 NDRG4Q9ULP0 352 aaKnown RBP6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 FRMPD2Q68DX3 1309 aaPredicted RBP6.23□□□□□ -1.41
SCAMP1-205ENST00000614488 TRIM43BA6NCK2 446 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 MBD3L4A6NDZ8 208 aaPredicted RBP6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 MBD3L3A6NE82 208 aaPredicted RBP6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 OVOL3O00110 214 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 GOLIM4O00461 696 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 PROP1O75360 226 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 ONECUT2O95948 504 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 NR2F6P10588 404 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 BRAFP15056 766 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 FBLP22087 321 aaKnown RBP6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 MYO1EQ12965 1108 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 EIF2B5Q13144 721 aaKnown RBP6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 CYB5RLQ6IPT4 315 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 ATG4AQ8WYN0 398 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 TRIM43Q96BQ3 446 aaPredicted RBP6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 SARAFQ96BY9 339 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 NMD3Q96D46 503 aaKnown RBP6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 MS4A7Q9GZW8 240 aaPredicted RBP6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 A1CFQ9NQ94 594 aaKnown RBP6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 SERTAD4Q9NUC0 356 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 RGS17Q9UGC6 210 aaPredicted RBP6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 USP19O94966 1318 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 SPATA31A6Q5VVP1 1343 aa6.22□□□□□ -1.41
SCAMP1-205ENST00000614488 MGEA5O60502 916 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 C1QL1O75973 258 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 IGLV2-14P01704 120 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 RHCEP18577 417 aa6.21□□□□□ -1.42
SCAMP1-205ENST00000614488 KLRC1P26715 233 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms