RNA–Protein interactions for RNA: ENST00000613073.4

CNOT3-208, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-208ENST00000613073 USTQ9Y2C2 406 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 PHF2O75151 1096 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 CTNNA2P26232 953 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 AP3M2P53677 418 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 ROR2Q01974 943 aaKnown RBP17.36■□□□□ 0.37
CNOT3-208ENST00000613073 LONRF1Q17RB8 773 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 SGSM1Q2NKQ1 1148 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 CCDC137Q6PK04 289 aaKnown RBP17.36■□□□□ 0.37
CNOT3-208ENST00000613073 MFN1Q8IWA4 741 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 LMNTD2Q8IXW0 634 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 ERP44Q9BS26 406 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 NIF3L1Q9GZT8 377 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 AVENQ9NQS1 362 aaPredicted RBP17.36■□□□□ 0.37
CNOT3-208ENST00000613073 ZDHHC18Q9NUE0 388 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 POLIQ9UNA4 740 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 PLXNA1Q9UIW2 1896 aa17.36■□□□□ 0.37
CNOT3-208ENST00000613073 GJC1P36383 396 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 RAP1GAPP47736 663 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 LIN9Q5TKA1 542 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 SPATA21Q7Z572 469 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 RPF1Q9H9Y2 349 aaKnown RBP17.35■□□□□ 0.37
CNOT3-208ENST00000613073 VTA1Q9NP79 307 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 CNTN6Q9UQ52 1028 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 TMEM120BA0PK00 339 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 RASGRF2O14827 1237 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 TNNC2P02585 160 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 NUDT17P0C025 328 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 MAMLD1Q13495 774 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 TBC1D25Q3MII6 688 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 ZNF484Q5JVG2 852 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 GPR142Q7Z601 462 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 B4GALNT2Q8NHY0 566 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 PPTC7Q8NI37 304 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 TRIM11Q96F44 468 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 EPAS1Q99814 870 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 MGAMO43451 1857 aa17.35■□□□□ 0.37
CNOT3-208ENST00000613073 H3BRB1 525 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 OAS1P00973 400 aaKnown RBP17.34■□□□□ 0.37
CNOT3-208ENST00000613073 NFICP08651 508 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 PHKA2P46019 1235 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 GRM1Q13255 1194 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 ORC1Q13415 861 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 SLC5A9Q2M3M2 681 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 FAM47EQ6ZV65 393 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 EXOC3L1Q86VI1 746 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 CCDC105Q8IYK2 499 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 SEC14L1Q92503 715 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 ITFG2Q969R8 447 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 ANKRD36BP1Q96IX9 119 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 C16orf70Q9BSU1 422 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 PPP1R12CQ9BZL4 782 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 TUT1Q9H6E5 874 aaKnown RBP17.34■□□□□ 0.37
CNOT3-208ENST00000613073 GINS2Q9Y248 185 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 TNFSF13BQ9Y275 285 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 PLXNB2O15031 1838 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 AGTP01019 485 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 ZNF132P52740 706 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 MGAT5Q09328 741 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 AUHQ13825 339 aaKnown RBP17.34■□□□□ 0.37
CNOT3-208ENST00000613073 CLUL1Q15846 466 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 C6orf118Q5T5N4 469 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 DUPD1Q68J44 220 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 ZDHHC24Q6UX98 284 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 TRIM72Q6ZMU5 477 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 ASRGL1Q7L266 308 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 GTF3C2Q8WUA4 911 aaPredicted RBP17.34■□□□□ 0.37
CNOT3-208ENST00000613073 C1orf54Q8WWF1 131 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 NLRP7Q8WX94 980 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 EZH1Q92800 747 aaPredicted RBP17.34■□□□□ 0.37
CNOT3-208ENST00000613073 PTPN18Q99952 460 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 TRIM4Q9C037 500 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 KATNBL1Q9H079 304 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 XYLT2Q9H1B5 865 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 MTUS1Q9ULD2 1270 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 TLR3O15455 904 aaKnown RBP17.34■□□□□ 0.37
CNOT3-208ENST00000613073 STAG3L1P0CL83 205 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 SMPD1P17405 629 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 GM2AP17900 193 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 CHRNA3P32297 505 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 GBP1P32455 592 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 PTGIRP43119 386 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 CDH8P55286 799 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 RPL7AP62424 266 aaKnown RBP17.34■□□□□ 0.37
CNOT3-208ENST00000613073 USP4Q13107 963 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 SURF1Q15526 300 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 PPP2R5EQ16537 467 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 UBR7Q8N806 425 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 GBA2Q9HCG7 927 aaPredicted RBP17.34■□□□□ 0.37
CNOT3-208ENST00000613073 PRMT7Q9NVM4 692 aaPredicted RBP17.34■□□□□ 0.37
CNOT3-208ENST00000613073 CTNNAL1Q9UBT7 734 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 ARL2BPQ9Y2Y0 163 aa17.34■□□□□ 0.37
CNOT3-208ENST00000613073 LACTBL1A8MY62 500 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 STRNO43815 780 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 TARSP26639 723 aaKnown RBP17.33■□□□□ 0.36
CNOT3-208ENST00000613073 ASPAP45381 313 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 PTP4A2Q12974 167 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 DHX34Q14147 1143 aaKnown RBP17.33■□□□□ 0.36
CNOT3-208ENST00000613073 SIX1Q15475 284 aaPredicted RBP17.33■□□□□ 0.36
CNOT3-208ENST00000613073 WDR72Q3MJ13 1102 aa17.33■□□□□ 0.36
CNOT3-208ENST00000613073 ZC3H12AQ5D1E8 599 aaKnown RBP17.33■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms