RNA–Protein interactions for RNA: ENST00000612946.4

TTC28-208, Transcript of tetratricopeptide repeat domain 28, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TTC28, Length 11,274 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-208ENST00000612946 KRT24Q2M2I5 525 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 LRRC17Q8N6Y2 441 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 ZBTB8BQ8NAP8 495 aaPredicted RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 RAD54LQ92698 747 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 C7orf25Q9BPX7 421 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 SENP7Q9BQF6 1050 aa9.11□□□□□ -0.95
TTC28-208ENST00000612946 REXO4Q9GZR2 422 aaKnown RBP9.11□□□□□ -0.95
TTC28-208ENST00000612946 SLC7A3Q8WY07 619 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 NRBP2Q9NSY0 501 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 UBAP1LF5GYI3 381 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 TRMUO75648 421 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 RDH13Q8NBN7 331 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 CHCHD6Q9BRQ6 235 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 PLAGL2Q9UPG8 496 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 PDLIM1O00151 329 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 DDHD2O94830 711 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 FTLP02792 175 aaPredicted RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 POLBP06746 335 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 RBBP7Q16576 425 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 THEMIS2Q5TEJ8 643 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 SPAG16Q8N0X2 631 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 CYP4Z2PQ8N1L4 340 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 BTBD9Q96Q07 612 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 VTA1Q9NP79 307 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 C5orf22Q49AR2 442 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 TMEM120AQ9BXJ8 343 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 UGT2B28Q9BY64 529 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 RAG1P15918 1043 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 KYAT3Q6YP21 454 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 ARID3BQ8IVW6 561 aaPredicted RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 SLC8A2Q9UPR5 921 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 CLOCKO15516 846 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 HIBADHP31937 336 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 ZNF844Q08AG5 666 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 METTL16Q86W50 562 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 MCPH1Q8NEM0 835 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 TOR1AIP2Q8NFQ8 470 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 NAT14Q8WUY8 206 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 RSAD1Q9HA92 442 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 COBLO75128 1261 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 CASP4P49662 377 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 DRAP1Q14919 205 aaPredicted RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 STILQ15468 1287 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 CACHD1Q5VU97 1274 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 TMC3Q7Z5M5 1100 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 EID3Q8N140 333 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 SNIP1Q8TAD8 396 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 SUCLG2Q96I99 432 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 WNK4Q96J92 1243 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 NMRK1Q9NWW6 199 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 CPSF3Q9UKF6 684 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 PCDHB6Q9Y5E3 794 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 OVOS2A0A0G2JMS6 1433 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 URB1O60287 2271 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 USP42Q9H9J4 1324 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 GSAPA4D1B5 854 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 ZC3H11AO75152 810 aaKnown RBP eCLIP9.1□□□□□ -0.95
TTC28-208ENST00000612946 YWHABP31946 246 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 TOB2Q14106 344 aaPredicted RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 FKBP9P1Q75LS8 142 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 SLC22A9Q8IVM8 553 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 ASZ1Q8WWH4 475 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 MKNK1Q9BUB5 465 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 UBE2QL1A1L167 161 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 APOL3O95236 402 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 SDC4P31431 198 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 PDIA5Q14554 519 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 ERMARDQ5T6L9 678 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 TTC23Q5W5X9 447 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 XPO7Q9UIA9 1087 aaKnown RBP9.1□□□□□ -0.95
TTC28-208ENST00000612946 PCDHA1Q9Y5I3 950 aa9.1□□□□□ -0.95
TTC28-208ENST00000612946 ANKARQ7Z5J8 1434 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 INO80Q9ULG1 1556 aaPredicted RBP9.09□□□□□ -0.95
TTC28-208ENST00000612946 ADSSP30520 456 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 LACTB2Q53H82 288 aaPredicted RBP9.09□□□□□ -0.95
TTC28-208ENST00000612946 KSR1Q8IVT5 923 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 ASAP3Q8TDY4 903 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 CCDC17Q96LX7 622 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 EFCAB10A6NFE3 127 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 RPL22P35268 128 aaKnown RBP9.09□□□□□ -0.95
TTC28-208ENST00000612946 SLC26A3P40879 764 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 PICALMQ13492 652 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 GRAMD1CQ8IYS0 662 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 UBASH3BQ8TF42 649 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 EAF2Q96CJ1 260 aaPredicted RBP9.09□□□□□ -0.95
TTC28-208ENST00000612946 NUP153P49790 1475 aaKnown RBP9.09□□□□□ -0.95
TTC28-208ENST00000612946 SPDYE16A6NNV3 312 aaPredicted RBP9.09□□□□□ -0.95
TTC28-208ENST00000612946 KRT34O76011 436 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 PTK6Q13882 451 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 SPDYE2Q495Y8 402 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 KMT5AQ9NQR1 393 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 ZNF219Q9P2Y4 722 aaPredicted RBP9.09□□□□□ -0.95
TTC28-208ENST00000612946 DNAJB4Q9UDY4 337 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 CPDO75976 1380 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 IRGMA1A4Y4 181 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 MYL6P60660 151 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 ACTR2P61160 394 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 COASYQ13057 564 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 SCARA3Q6AZY7 606 aa9.09□□□□□ -0.95
TTC28-208ENST00000612946 TRMT1LQ7Z2T5 733 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms