RNA–Protein interactions for RNA: ENST00000611712.4

LIG4-204, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LIG4, Length 4,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-204ENST00000611712 L3MBTL1Q9Y468 752 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 ATXN2Q99700 1313 aaKnown RBP9.09□□□□□ -0.95
LIG4-204ENST00000611712 LIASO43766 372 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 HBP1O60381 514 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 MTA2O94776 668 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 ANP32DO95626 131 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 PDHA1P08559 390 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 SKIP12755 728 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 SLC12A2P55011 1212 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 NXNQ6DKJ4 435 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 ZPBP2Q6X784 338 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 RAPH1Q70E73 1250 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 NLRP9Q7RTR0 991 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 DEFB132Q7Z7B7 95 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 CCDC125Q86Z20 511 aa9.09□□□□□ -0.95
LIG4-204ENST00000611712 CREB3O43889 395 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 LMNAP02545 664 aaKnown RBP9.09□□□□□ -0.96
LIG4-204ENST00000611712 LCP1P13796 627 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 NCF2P19878 526 aaPredicted RBP9.09□□□□□ -0.96
LIG4-204ENST00000611712 SESN2P58004 480 aaPredicted RBP9.09□□□□□ -0.96
LIG4-204ENST00000611712 RTP1P59025 263 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 TMEM132BQ14DG7 1078 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 RPAINQ86UA6 219 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 PHF13Q86YI8 300 aaPredicted RBP9.09□□□□□ -0.96
LIG4-204ENST00000611712 TTC16Q8NEE8 873 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 DNERQ8NFT8 737 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 BEST2Q8NFU1 509 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 LMO3Q8TAP4 145 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 FAM161BQ96MY7 647 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 SLITRK1Q96PX8 696 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 USP18Q9UMW8 372 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 POLIQ9UNA4 740 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 COQ4Q9Y3A0 265 aa9.09□□□□□ -0.96
LIG4-204ENST00000611712 TRIM49D1C9J1S8 452 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 SPECC1L-ADORA2AF8WAN1 911 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 SMAPO00193 183 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 GAS2O43903 313 aaKnown RBP9.08□□□□□ -0.96
LIG4-204ENST00000611712 PIAS1O75925 651 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 SERPINB6P35237 376 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 TNFSF9P41273 254 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 PTPN11Q06124 597 aaPredicted RBP9.08□□□□□ -0.96
LIG4-204ENST00000611712 METTL7BQ6UX53 244 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.08□□□□□ -0.96
LIG4-204ENST00000611712 TRAPPC12Q8WVT3 735 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 FIZ1Q96SL8 496 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 VPS11Q9H270 941 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 SMYD2Q9NRG4 433 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 GPATCH2LQ9NWQ4 482 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 COMMD10Q9Y6G5 202 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 M0QZ92 97 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 CCDC22O60826 627 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 GH1P01241 217 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 SNRPAP09012 282 aaKnown RBP9.08□□□□□ -0.96
LIG4-204ENST00000611712 CREB1P16220 341 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 ECHS1P30084 290 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 RFC1P35251 1148 aaPredicted RBP9.08□□□□□ -0.96
LIG4-204ENST00000611712 MAP7D1Q3KQU3 841 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 MFSD5Q6N075 450 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 STAMBPL1Q96FJ0 436 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 GPR88Q9GZN0 384 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 KLHL8Q9P2G9 620 aaPredicted RBP9.08□□□□□ -0.96
LIG4-204ENST00000611712 G3BP2Q9UN86 482 aaKnown RBP9.08□□□□□ -0.96
LIG4-204ENST00000611712 MYH1P12882 1939 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 NAV1Q8NEY1 1877 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 MAP3K7O43318 606 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 PAEPP09466 180 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 PDGFRBP09619 1106 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 UBA1P22314 1058 aaKnown RBP9.08□□□□□ -0.96
LIG4-204ENST00000611712 EIF4BP23588 611 aaKnown RBP9.08□□□□□ -0.96
LIG4-204ENST00000611712 ALDH5A1P51649 535 aaPredicted RBP9.08□□□□□ -0.96
LIG4-204ENST00000611712 KCNJ2P63252 427 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 AP1B1Q10567 949 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 GEN1Q17RS7 908 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 MDH1BQ5I0G3 518 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 ZBTB41Q5SVQ8 909 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 DPY19L2Q6NUT2 758 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 LRRC6Q86X45 466 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 DDX55Q8NHQ9 600 aaKnown RBP eCLIP9.08□□□□□ -0.96
LIG4-204ENST00000611712 CCT6BQ92526 530 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 GBP5Q96PP8 586 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 XPNPEP1Q9NQW7 623 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 PCMTD2Q9NV79 361 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 ERAP1Q9NZ08 941 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 ARHGAP28Q9P2N2 729 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 HEY2Q9UBP5 337 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 A0A1B0GUL6 1792 aa9.08□□□□□ -0.96
LIG4-204ENST00000611712 MROH7Q68CQ1 1323 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 SPATA31C2B4DYI2 1134 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 SPAG6O75602 509 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 STAG3L1P0CL83 205 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 KDSRQ06136 332 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 CAPSQ13938 189 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 CYP1B1Q16678 543 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 BOLA3Q53S33 107 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 ABHD15Q6UXT9 468 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 ARMCX2Q7L311 632 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 DTX3LQ8TDB6 740 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 RXFP2Q8WXD0 754 aa9.07□□□□□ -0.96
LIG4-204ENST00000611712 DDX27Q96GQ7 796 aaKnown RBP9.07□□□□□ -0.96
LIG4-204ENST00000611712 TMEM109Q9BVC6 243 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms