RNA–Protein interactions for RNA: ENST00000610907.1

PABPC1-224, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 1 (best) BASIC

Gene PABPC1, Length 1,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-224ENST00000610907 CEP120Q8N960 986 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 CMASQ8NFW8 434 aaPredicted RBP10.99□□□□□ -0.65
PABPC1-224ENST00000610907 PRMT1Q99873 361 aaKnown RBP10.99□□□□□ -0.65
PABPC1-224ENST00000610907 NCAPGQ9BPX3 1015 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 PLCD4Q9BRC7 762 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 PDZD7Q9H5P4 517 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 SYNCQ9H7C4 482 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 PDGFCQ9NRA1 345 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 ASNSD1Q9NWL6 643 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 EURLQ9NYK6 297 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 SENP1Q9P0U3 644 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 FETUBQ9UGM5 382 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 BARX2Q9UMQ3 279 aaPredicted RBP10.99□□□□□ -0.65
PABPC1-224ENST00000610907 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.99□□□□□ -0.65
PABPC1-224ENST00000610907 NAALADL1Q9UQQ1 740 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 DERAQ9Y315 318 aa10.99□□□□□ -0.65
PABPC1-224ENST00000610907 ZSWIM8A7E2V4 1837 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 A0A087WZ62 844 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 TMEM120BA0PK00 339 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 ITGB3P05106 788 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 GJB1P08034 283 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 NFICP08651 508 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 TSHRP16473 764 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 GPD2P43304 727 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 PLCB3Q01970 1234 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 MYO1EQ12965 1108 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 GPS1Q13098 491 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 TMEM132DQ14C87 1099 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 SLC10A6Q3KNW5 377 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 RNASEH2BQ5TBB1 312 aaKnown RBP10.98□□□□□ -0.65
PABPC1-224ENST00000610907 VSTM1Q6UX27 236 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 CENPUQ71F23 418 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 ZNF410Q86VK4 478 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 TMEM192Q8IY95 271 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 LRRC34Q8IZ02 419 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 DYDC1Q8WWB3 177 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 CKAP2Q8WWK9 683 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 SGSM3Q96HU1 749 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 HPDLQ96IR7 371 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 ACAP3Q96P50 834 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 FDXACB1Q9BRP7 624 aaPredicted RBP10.98□□□□□ -0.65
PABPC1-224ENST00000610907 ADPGKQ9BRR6 497 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 FHDC1Q9C0D6 1143 aaPredicted RBP10.98□□□□□ -0.65
PABPC1-224ENST00000610907 SDCBP2Q9H190 292 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 PLEKHA5Q9HAU0 1116 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 CYTH4Q9UIA0 394 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 AKT3Q9Y243 479 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 CAPN7Q9Y6W3 813 aa10.98□□□□□ -0.65
PABPC1-224ENST00000610907 A0A1B0GUA9 196 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 CCT8L1PA6NM43 557 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 H0YHG0 523 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 GOLGA8SH3BPF8 625 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 MICAL2O94851 1124 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 GSTA1P08263 222 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 VIMP08670 466 aaKnown RBP10.97□□□□□ -0.65
PABPC1-224ENST00000610907 BRAFP15056 766 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 ARF4P18085 180 aaPredicted RBP10.97□□□□□ -0.65
PABPC1-224ENST00000610907 CDH8P55286 799 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 SNX16P57768 344 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 PCBP1Q15365 356 aaKnown RBP eCLIP10.97□□□□□ -0.652e-18■■□□□ 11.9
PABPC1-224ENST00000610907 TXNRD3NBQ6F5E7 133 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 MTHFD1LQ6UB35 978 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 LCLAT1Q6UWP7 414 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 MAMDC4Q6UXC1 1216 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 MOB2Q70IA6 237 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 PACS2Q86VP3 889 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 PPIL6Q8IXY8 311 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 ARFGAP1Q8N6T3 406 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 JOSD2Q8TAC2 188 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 AFG1LQ8WV93 481 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 CCT6BQ92526 530 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 MAML1Q92585 1016 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 CPXM1Q96SM3 734 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 FAM118BQ9BPY3 351 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 OSBPL7Q9BZF2 842 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 ELOVL4Q9GZR5 314 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 EFCC1Q9HA90 598 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 RSAD1Q9HA92 442 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 SAYSD1Q9NPB0 183 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 KLHL11Q9NVR0 708 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 NKIRAS1Q9NYS0 192 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 SLC24A2Q9UI40 661 aa10.97□□□□□ -0.65
PABPC1-224ENST00000610907 APOC4-APOC2K7ER74 178 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 SGK1O00141 431 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 CST8O60676 142 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 CAPN15O75808 1086 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 ENDOD1O94919 500 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 TRUB2O95900 331 aaKnown RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 APOC2P02655 101 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 ERBB2P04626 1255 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 SETSIPP0DME0 302 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 HOXD8P13378 290 aaPredicted RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 PECAM1P16284 738 aaPredicted RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 STIP1P31948 543 aaKnown RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 EPHX2P34913 555 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 GRM5P41594 1212 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 RAP1GAPP47736 663 aa10.96□□□□□ -0.65
PABPC1-224ENST00000610907 GCLCP48506 637 aaPredicted RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 ZNF143P52747 638 aaPredicted RBP10.96□□□□□ -0.65
PABPC1-224ENST00000610907 IGBP1P78318 339 aa10.96□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms