RNA–Protein interactions for RNA: ENST00000610462.1

CSPG5-205, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 5 BASIC

Gene CSPG5, Length 2,073 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-205ENST00000610462 KRT7P08729 469 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 CYP2C9P11712 490 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 VPS41P49754 854 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 HADHQ16836 314 aaKnown RBP29.54■■■□□ 2.32
CSPG5-205ENST00000610462 C6orf118Q5T5N4 469 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 GSTA5Q7RTV2 222 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 NT5C1AQ9BXI3 368 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 RSPH14Q9UHP6 348 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 DNPEPQ9ULA0 475 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 SRRM3A6NNA2 597 aaPredicted RBP29.54■■■□□ 2.32
CSPG5-205ENST00000610462 NOTUMQ6P988 496 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 LCLAT1Q6UWP7 414 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 TLK2Q86UE8 772 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 OSMRQ99650 979 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 EIF2AQ9BY44 585 aaKnown RBP29.54■■■□□ 2.32
CSPG5-205ENST00000610462 EPN3Q9H201 632 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 CXCL16Q9H2A7 254 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 FLRT1Q9NZU1 646 aa29.54■■■□□ 2.32
CSPG5-205ENST00000610462 DRG1Q9Y295 367 aaKnown RBP29.54■■■□□ 2.32
CSPG5-205ENST00000610462 PDCD11Q14690 1871 aaKnown RBP29.53■■■□□ 2.32
CSPG5-205ENST00000610462 C3orf70A6NLC5 250 aaPredicted RBP29.53■■■□□ 2.32
CSPG5-205ENST00000610462 ZNF865P0CJ78 1059 aaPredicted RBP29.53■■■□□ 2.32
CSPG5-205ENST00000610462 MFSD10Q14728 455 aa29.53■■■□□ 2.32
CSPG5-205ENST00000610462 PTGISQ16647 500 aa29.53■■■□□ 2.32
CSPG5-205ENST00000610462 OLFML2BQ68BL8 750 aa29.53■■■□□ 2.32
CSPG5-205ENST00000610462 EMC1Q8N766 993 aa29.53■■■□□ 2.32
CSPG5-205ENST00000610462 UBA3Q8TBC4 463 aa29.53■■■□□ 2.32
CSPG5-205ENST00000610462 EFR3BQ9Y2G0 817 aa29.53■■■□□ 2.32
CSPG5-205ENST00000610462 ECM2O94769 699 aaPredicted RBP29.52■■■□□ 2.32
CSPG5-205ENST00000610462 DARSP14868 501 aaKnown RBP29.52■■■□□ 2.32
CSPG5-205ENST00000610462 CYP3A5P20815 502 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 YARSP54577 528 aaKnown RBP29.52■■■□□ 2.32
CSPG5-205ENST00000610462 ZBTB6Q15916 424 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 IZUMO3Q5VZ72 239 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 UHMK1Q8TAS1 419 aaKnown RBP29.52■■■□□ 2.32
CSPG5-205ENST00000610462 CCHCR1Q8TD31 782 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 ZMAT2Q96NC0 199 aaKnown RBP29.52■■■□□ 2.32
CSPG5-205ENST00000610462 TLDC2A0PJX2 215 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 ACAP1Q15027 740 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 CST9Q5W186 159 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 DPH6Q7L8W6 267 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 IPO4Q8TEX9 1081 aaKnown RBP29.52■■■□□ 2.32
CSPG5-205ENST00000610462 PPP1R13LQ8WUF5 828 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 RABEP2Q9H5N1 569 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 ZWILCHQ9H900 591 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 ZNF148Q9UQR1 794 aa29.52■■■□□ 2.32
CSPG5-205ENST00000610462 RGS16O15492 202 aaPredicted RBP29.51■■■□□ 2.31
CSPG5-205ENST00000610462 IL1R2P27930 398 aa29.51■■■□□ 2.31
CSPG5-205ENST00000610462 STILQ15468 1287 aa29.51■■■□□ 2.31
CSPG5-205ENST00000610462 ROPN1BQ9BZX4 212 aaPredicted RBP29.51■■■□□ 2.31
CSPG5-205ENST00000610462 ROPN1Q9HAT0 212 aaPredicted RBP29.51■■■□□ 2.31
CSPG5-205ENST00000610462 TSPAN16Q9UKR8 245 aa29.51■■■□□ 2.31
CSPG5-205ENST00000610462 SRCAPQ6ZRS2 3230 aa29.51■■■□□ 2.31
CSPG5-205ENST00000610462 ALLCQ8N6M5 410 aa29.51■■■□□ 2.31
CSPG5-205ENST00000610462 DDX23Q9BUQ8 820 aaKnown RBP29.51■■■□□ 2.31
CSPG5-205ENST00000610462 IGF2BP3O00425 579 aaKnown RBP eCLIP29.5■■■□□ 2.31
CSPG5-205ENST00000610462 CCT5P48643 541 aa29.5■■■□□ 2.31
CSPG5-205ENST00000610462 PSEN2P49810 448 aa29.5■■■□□ 2.31
CSPG5-205ENST00000610462 VCPP55072 806 aaKnown RBP29.5■■■□□ 2.31
CSPG5-205ENST00000610462 ADAM17P78536 824 aa29.5■■■□□ 2.31
CSPG5-205ENST00000610462 HIC1Q14526 733 aa29.5■■■□□ 2.31
CSPG5-205ENST00000610462 BEST2Q8NFU1 509 aa29.5■■■□□ 2.31
CSPG5-205ENST00000610462 EPS8L3Q8TE67 593 aaKnown RBP29.5■■■□□ 2.31
CSPG5-205ENST00000610462 NKD2Q969F2 451 aaPredicted RBP29.5■■■□□ 2.31
CSPG5-205ENST00000610462 LENG1Q96BZ8 264 aaPredicted RBP29.5■■■□□ 2.31
CSPG5-205ENST00000610462 MIS12Q9H081 205 aa29.5■■■□□ 2.31
CSPG5-205ENST00000610462 CNOT10Q9H9A5 744 aaKnown RBP29.5■■■□□ 2.31
CSPG5-205ENST00000610462 TRIP12Q14669 1992 aaPredicted RBP29.5■■■□□ 2.31
CSPG5-205ENST00000610462 HAS3O00219 553 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 TULP2O00295 520 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 RASGRF2O14827 1237 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 AGTP01019 485 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 AXLP30530 894 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 HUNKP57058 714 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 OASLQ15646 514 aaKnown RBP29.49■■■□□ 2.31
CSPG5-205ENST00000610462 TAZQ16635 292 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 HIBCHQ6NVY1 386 aaPredicted RBP29.49■■■□□ 2.31
CSPG5-205ENST00000610462 SMIM23A6NLE4 172 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 KDELR1P24390 212 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 SMTNL2Q2TAL5 461 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 FAM102AQ5T9C2 384 aaPredicted RBP29.49■■■□□ 2.31
CSPG5-205ENST00000610462 ALKAL1Q6UXT8 129 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 PRUNE1Q86TP1 453 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 LRRC52Q8N7C0 313 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 DNAJB3Q8WWF6 145 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 MRPL45Q9BRJ2 306 aaKnown RBP29.49■■■□□ 2.31
CSPG5-205ENST00000610462 CNTN3Q9P232 1028 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 TUBGCP4Q9UGJ1 667 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 HES2Q9Y543 173 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 SNX9Q9Y5X1 595 aa29.49■■■□□ 2.31
CSPG5-205ENST00000610462 NDUFAB1O14561 156 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 PPEF2O14830 753 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 RNF8O76064 485 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 TTC4O95801 387 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 PFKMP08237 780 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 IRX5P78411 483 aaPredicted RBP29.48■■■□□ 2.31
CSPG5-205ENST00000610462 P3H1Q32P28 736 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 USP6NLQ92738 828 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 FOXP3Q9BZS1 431 aa29.48■■■□□ 2.31
CSPG5-205ENST00000610462 ASNSD1Q9NWL6 643 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms