RNA–Protein interactions for RNA: ENST00000609104.5

USP6NL-205, Transcript of USP6 N-terminal like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP6NL, Length 11,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-205ENST00000609104 ERBB3P21860 1342 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 PDE5AO76074 875 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 CTSHP09668 335 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 ZNF23P17027 643 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 AGAP9Q5VTM2 703 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 SGMS1Q86VZ5 419 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 SGF29Q96ES7 293 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 SIKE1Q9BRV8 207 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 WWOXQ9NZC7 414 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 PRG3Q9Y2Y8 225 aaPredicted RBP13.58□□□□□ -0.24
USP6NL-205ENST00000609104 NQO1P15559 274 aaKnown RBP13.58□□□□□ -0.24
USP6NL-205ENST00000609104 STILQ15468 1287 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 TPCN2Q8NHX9 752 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 FOXP3Q9BZS1 431 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 INTS13Q9NVM9 706 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 HLA-DRAP01903 254 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 GRK2P25098 689 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 HSPA13P48723 471 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 CORO7P57737 925 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 CYP51A1Q16850 503 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 ALFQ53S48 1182 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 SCUBE1Q8IWY4 988 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 ZBTB10Q96DT7 871 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 GTF2A1LQ9UNN4 478 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 VWA5AO00534 786 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 CD4P01730 458 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 HOXD10P28358 340 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 NRKQ7Z2Y5 1582 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 TGM2P21980 687 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 ACADSBP45954 432 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 KCNB2Q92953 911 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 PPP1R14AQ96A00 147 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 WDCPQ9H6R7 721 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 NCKAP1LP55160 1127 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 EPS8L3Q8TE67 593 aaKnown RBP13.58□□□□□ -0.24
USP6NL-205ENST00000609104 DDI1Q8WTU0 396 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 HIC2Q96JB3 615 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 AP4S1Q9Y587 144 aa13.58□□□□□ -0.24
USP6NL-205ENST00000609104 SPATA31E1Q6ZUB1 1445 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 STK4Q13043 487 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 SV2CQ496J9 727 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 ACAD10Q6JQN1 1059 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 TRIM65Q6PJ69 517 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 STOX1Q6ZVD7 989 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 CCDC33Q8N5R6 958 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 TRMT6Q9UJA5 497 aaKnown RBP13.57□□□□□ -0.24
USP6NL-205ENST00000609104 KRT78Q8N1N4 520 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 JADE3Q92613 823 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 SPRTNQ9H040 489 aaPredicted RBP13.57□□□□□ -0.24
USP6NL-205ENST00000609104 RFX7Q2KHR2 1363 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 PDZK1P1A8MUH7 402 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 RBP3P10745 1247 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 CASKIN2Q8WXE0 1202 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 VPS33BQ9H267 617 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 DCDC2Q9UHG0 476 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 PCDHB2Q9Y5E7 798 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 DGAT1O75907 488 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 ACADSP16219 412 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 CENPCQ03188 943 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 MFSD4BQ5TF39 518 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 C12orf60Q5U649 245 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 C19orf18Q8NEA5 215 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 HSMCR30P0CW71 290 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 NUMBP49757 651 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 NPEPPSP55786 919 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 PRKCQQ04759 706 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 AMHR2Q16671 573 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 CCDC149Q6ZUS6 474 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 COL23A1Q86Y22 540 aaPredicted RBP13.57□□□□□ -0.24
USP6NL-205ENST00000609104 COL15A1P39059 1388 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 PSMD14O00487 310 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 SUPT7LO94864 414 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 MAP3K6O95382 1288 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 OR1G1P47890 313 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 HARS2P49590 506 aaKnown RBP13.57□□□□□ -0.24
USP6NL-205ENST00000609104 STX5Q13190 355 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 PLEKHA7Q6IQ23 1121 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 UNC45BQ8IWX7 931 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 SCFD2Q8WU76 684 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 EIF3LQ9Y262 564 aaKnown RBP13.57□□□□□ -0.24
USP6NL-205ENST00000609104 MYO10Q9HD67 2058 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 A0A1W2PQJ5 194 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 TRIM49D1C9J1S8 452 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 CPSF1Q10570 1443 aaKnown RBP13.57□□□□□ -0.24
USP6NL-205ENST00000609104 MTFR1Q15390 333 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 KAT2BQ92831 832 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 DMAP1Q9NPF5 467 aaPredicted RBP13.57□□□□□ -0.24
USP6NL-205ENST00000609104 KIAA0391O15091 583 aaKnown RBP13.57□□□□□ -0.24
USP6NL-205ENST00000609104 IL18RAPO95256 599 aa13.57□□□□□ -0.24
USP6NL-205ENST00000609104 C1orf131Q8NDD1 294 aaKnown RBP13.57□□□□□ -0.24
USP6NL-205ENST00000609104 SOAT2O75908 522 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 ITIH4Q14624 930 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 ASB14A6NK59 587 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 PARNO95453 639 aaKnown RBP13.56□□□□□ -0.24
USP6NL-205ENST00000609104 SCTRP47872 440 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 RFX3P48380 749 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 SARSP49591 514 aaKnown RBP13.56□□□□□ -0.24
USP6NL-205ENST00000609104 XKR3Q5GH77 459 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 EFCAB12Q6NXP0 572 aa13.56□□□□□ -0.24
USP6NL-205ENST00000609104 BHMTQ93088 406 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms