RNA–Protein interactions for RNA: ENST00000606066.1

CTSA-211, Transcript of cathepsin A, humanhuman

TSL 5

Gene CTSA, Length 603 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-211ENST00000606066 PPM1KQ8N3J5 372 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 LMO3Q8TAP4 145 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 SUSD6Q92537 303 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 PKMYT1Q99640 499 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 SEPT5Q99719 369 aaPredicted RBP15.2■□□□□ 0.02
CTSA-211ENST00000606066 CISHQ9NSE2 258 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 TMLHEQ9NVH6 421 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 TAB2Q9NYJ8 693 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 LIMA1Q9UHB6 759 aaKnown RBP15.2■□□□□ 0.02
CTSA-211ENST00000606066 MUTYHQ9UIF7 546 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 SLC27A5Q9Y2P5 690 aa15.2■□□□□ 0.02
CTSA-211ENST00000606066 USP15Q9Y4E8 981 aaPredicted RBP15.2■□□□□ 0.02
CTSA-211ENST00000606066 LRRC10BA6NIK2 292 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 LOC730098B7Z3J9 87 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 CCL16O15467 120 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 ATP2C2O75185 946 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 CILPO75339 1184 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 VNN2O95498 520 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 HAPLN1P10915 354 aaPredicted RBP15.19■□□□□ 0.02
CTSA-211ENST00000606066 ZNF18P17022 549 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 EPHB3P54753 998 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 CYP27A1Q02318 531 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 GCNT1Q02742 428 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 TWF1Q12792 350 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 MDH1BQ5I0G3 518 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 ENOSF1Q7L5Y1 443 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 MYLPFQ96A32 169 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 JAKMIP2Q96AA8 810 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 ZNF707Q96C28 371 aaPredicted RBP15.19■□□□□ 0.02
CTSA-211ENST00000606066 PCED1BQ96HM7 432 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 ZNF512Q96ME7 567 aaPredicted RBP15.19■□□□□ 0.02
CTSA-211ENST00000606066 PRRX2Q99811 253 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 CRACR2AQ9BSW2 395 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 VPS16Q9H269 839 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 DPEP3Q9H4B8 488 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 CRTAC1Q9NQ79 661 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 YIPF1Q9Y548 306 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 ASB3Q9Y575 518 aa15.19■□□□□ 0.02
CTSA-211ENST00000606066 ATP8B3O60423 1300 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 GOLGA6L19H0YKK7 550 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 PTPN2P17706 415 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 RPL10AP62906 217 aaKnown RBP15.18■□□□□ 0.02
CTSA-211ENST00000606066 VEPH1Q14D04 833 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 IQCB1Q15051 598 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 TRIM65Q6PJ69 517 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 LRSAM1Q6UWE0 723 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 VSTM1Q6UX27 236 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 TRIM67Q6ZTA4 783 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 ACOT1Q86TX2 421 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 ITIH5Q86UX2 942 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 FAM200AQ8TCP9 573 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 TMEM176AQ96HP8 235 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 ELOVL4Q9GZR5 314 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 CRISPLD1Q9H336 500 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 CBX8Q9HC52 389 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 NME7Q9Y5B8 376 aa15.18■□□□□ 0.02
CTSA-211ENST00000606066 SLC9A1P19634 815 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 CYP2F1P24903 491 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 PON1P27169 355 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 MAGEA11P43364 429 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 COPB1P53618 953 aaKnown RBP15.17■□□□□ 0.02
CTSA-211ENST00000606066 MFAP3P55082 362 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 TAF12Q16514 161 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 FILIP1LQ4L180 1135 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 SMYD5Q6GMV2 418 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 PHLDB3Q6NSJ2 640 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 RRAGAQ7L523 313 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 LEMD2Q8NC56 503 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 CEP295NLQ96MC4 621 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 HEXIM2Q96MH2 286 aaKnown RBP15.17■□□□□ 0.02
CTSA-211ENST00000606066 ARID3AQ99856 593 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 MED10Q9BTT4 135 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 PHF7Q9BWX1 381 aaPredicted RBP15.17■□□□□ 0.02
CTSA-211ENST00000606066 HSD3B7Q9H2F3 369 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 TSPY26PQ9H489 355 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 WDR6Q9NNW5 1121 aaKnown RBP15.17■□□□□ 0.02
CTSA-211ENST00000606066 UBE2TQ9NPD8 197 aaPredicted RBP15.17■□□□□ 0.02
CTSA-211ENST00000606066 APEX2Q9UBZ4 518 aa15.17■□□□□ 0.02
CTSA-211ENST00000606066 TRIM66O15016 1216 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 BDNFP23560 247 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 ANXA13P27216 316 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 GRIK1P39086 918 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 CDR1P51861 262 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 ZXDAP98168 799 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 ZNF394Q53GI3 561 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 CYP4A22Q5TCH4 519 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 GRASPQ7Z6J2 395 aaPredicted RBP15.16■□□□□ 0.02
CTSA-211ENST00000606066 LUZP1Q86V48 1076 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 ARHGEF19Q8IW93 802 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 TTC9BQ8N6N2 239 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 WHAMMQ8TF30 809 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 TWNKQ96RR1 684 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 B3GNT5Q9BYG0 378 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 HMGXB4Q9UGU5 601 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 KIAA1257Q9ULG3 409 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 PCDHB4Q9Y5E5 795 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 USP34Q70CQ2 3546 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 CACNA1HO95180 2353 aa15.16■□□□□ 0.02
CTSA-211ENST00000606066 TSC2P49815 1807 aa15.15■□□□□ 0.02
CTSA-211ENST00000606066 TMEM221A6NGB7 291 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms