RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 AKR1B10O60218 316 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PFDN1O60925 122 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 ATP2C2O75185 946 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CSDE1O75534 798 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 RAPGEF3O95398 923 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 RPN1P04843 607 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 SERPING1P05155 500 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 EIF2S1P05198 315 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 ITGA2BP08514 1039 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 TRIM21P19474 475 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PTPN4P29074 926 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 ATP5DP30049 168 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 LONP1P36776 959 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 RGS2P41220 211 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MATR3P43243 847 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MAGEA10P43363 369 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CDK7P50613 346 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 SCNN1BP51168 640 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 NCKAP1LP55160 1127 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 SESN3P58005 492 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 BPIFB4P59827 614 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 YBX1P67809 324 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 GPSM2P81274 684 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 DAB2P98082 770 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 XIAPP98170 497 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 ATP2C1P98194 919 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 RPS6KA1Q15418 735 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 BBS9Q3SYG4 887 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PDCD4Q53EL6 469 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MIIPQ5JXC2 388 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 FKBP15Q5T1M5 1219 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 FAM91A1Q658Y4 838 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 DUPD1Q68J44 220 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 BORAQ6PGQ7 559 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZC3H14Q6PJT7 736 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 C4orf50Q6ZRC1 276 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 NCCRP1Q6ZVX7 275 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 USP49Q70CQ1 688 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 FRMD5Q7Z6J6 570 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 LONP2Q86WA8 852 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 LDHDQ86WU2 507 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 JAMLQ86YT9 394 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CCDC65Q8IXS2 484 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 DIS3L2Q8IYB7 885 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 GRAMD1CQ8IYS0 662 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 NME8Q8N427 588 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CRACR2BQ8N4Y2 399 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 SRBD1Q8N5C6 995 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PPFIBP2Q8ND30 876 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MDM1Q8TC05 714 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 LRRC8CQ8TDW0 803 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PRCCQ92733 491 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 TAF4BQ92750 862 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 TEKT1Q969V4 418 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 SLC7A6OSQ96CW6 309 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MTMR8Q96EF0 704 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 EDC3Q96F86 508 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MAGEB18Q96M61 343 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 RUNDC3BQ96NL0 473 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 SERPINB12Q96P63 405 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 NUDCD1Q96RS6 583 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CGREF1Q99674 301 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 GPR20Q99678 358 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 HNRNPABQ99729 332 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CCSER1Q9C0I3 900 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CARD9Q9H257 536 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CUEDC2Q9H467 287 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MLXIPQ9HAP2 919 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 NLRC4Q9NPP4 1024 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZDHHC18Q9NUE0 388 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 FAIMQ9NVQ4 179 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PTTG2Q9NZH5 202 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 GMIPQ9P107 970 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 CHPF2Q9P2E5 772 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 KLHL14Q9P2G3 628 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 SUCLA2Q9P2R7 463 aaPredicted RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PNMA2Q9UL42 364 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 MAP3K2Q9Y2U5 619 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 NOC2LQ9Y3T9 749 aaKnown RBP4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PCDHB6Q9Y5E3 794 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PCDHB14Q9Y5E9 798 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 PCDHB12Q9Y5F1 795 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 USH1CQ9Y6N9 552 aa4.33□□□□□ -1.72
HMGB1P50-201ENST00000605814 NWD1Q149M9 1564 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 A0A0J9YVX5 310 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 PGRMC1O00264 195 aaKnown RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 PODXLO00592 558 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 RGS16O15492 202 aaPredicted RBP4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 SORBS3O60504 671 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ATP9AO75110 1047 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 PALMO75781 387 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 DCTN3O75935 186 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 CIAO1O76071 339 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 GFPT2O94808 682 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 ZWINTO95229 277 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 EFEMP2O95967 443 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 LYNP07948 512 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 T-ENOLP0DO92 83 aa4.32□□□□□ -1.72
HMGB1P50-201ENST00000605814 RARGP13631 454 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms