RNA–Protein interactions for RNA: ENST00000604516.1

HMGN3-AS1-201, HMGN3 antisense RNA 1, humanhuman

TSL 1 (best) BASIC

Gene HMGN3-AS1, Length 2,946 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-AS1-201ENST00000604516 CNPY4Q8N129 248 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 BBOF1Q8ND07 529 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 HSPH1Q92598 858 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PAIP2Q9BPZ3 127 aaKnown RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TPX2Q9ULW0 747 aaKnown RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TNFSF13BQ9Y275 285 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 OTOFQ9HC10 1997 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 EXOC1LA0A1B0GW35 172 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CCT8L1PA6NM43 557 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CXCL11O14625 94 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GRAP2O75791 330 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GCAP28676 217 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 POLR2BP30876 1174 aaKnown RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TTLL4Q14679 1199 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ANKRD22Q5VYY1 191 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MAP1SQ66K74 1059 aaPredicted RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 XYLT1Q86Y38 959 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CDCA5Q96FF9 252 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PIWIL1Q96J94 861 aaKnown RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MPHOSPH6Q99547 160 aaKnown RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CCDC134Q9H6E4 229 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 VPS37BQ9H9H4 285 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ABCF3Q9NUQ8 709 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 HAUS2Q9NVX0 235 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ERAP1Q9NZ08 941 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GINS2Q9Y248 185 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 M0QYV0 167 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MICAL2O94851 1124 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ARF4P18085 180 aaPredicted RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 LMNB2Q03252 620 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PTPN11Q06124 597 aaPredicted RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SLC10A6Q3KNW5 377 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 FAM133BQ5BKY9 247 aaKnown RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ARMCX2Q7L311 632 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ANKS4BQ8N8V4 417 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 C12orf29Q8N999 325 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 HEXIM2Q96MH2 286 aaKnown RBP12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 BCO2Q9BYV7 579 aa12.41□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ANK1P16157 1881 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SNX3O60493 162 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 LGALS2P05162 132 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PDIA2Q13087 525 aaKnown RBP12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MMRN1Q13201 1228 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 AMHR2Q16671 573 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 RNASEH2BQ5TBB1 312 aaKnown RBP12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 DRICH1Q6PGQ1 229 aaPredicted RBP12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 NIPA2Q8N8Q9 360 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CXorf38Q8TB03 319 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SLC35B2Q8TB61 432 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 AFG1LQ8WV93 481 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CALN1Q9BXU9 219 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 PDZD7Q9H5P4 517 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 SLC40A1Q9NP59 571 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 STRIP2Q9ULQ0 834 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 AGAP1Q9UPQ3 857 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 TCEA3O75764 348 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 KDELR1P24390 212 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MIPP30301 263 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 GJA5P36382 358 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 ARHGAP1Q07960 439 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 STAT4Q14765 748 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MSS51Q4VC12 460 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 KCTD6Q8NC69 237 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 MAML1Q92585 1016 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 CCDC77Q9BR77 488 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 EURLQ9NYK6 297 aa12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 DRG1Q9Y295 367 aaKnown RBP12.4□□□□□ -0.42
HMGN3-AS1-201ENST00000604516 A0A0G2JMZ2 1700 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TCRBV7S3A2A0A539 114 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CILPO75339 1184 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ATP5DP30049 168 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 STX2P32856 288 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CTCFP49711 727 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 COPS2P61201 443 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TAP1Q03518 808 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MYO1EQ12965 1108 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PKN2Q16513 984 aaKnown RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 CDO1Q16878 200 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ILDR2Q71H61 639 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 UNC45BQ8IWX7 931 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C4orf33Q8N1A6 199 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 NKD2Q969F2 451 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 THOC1Q96FV9 657 aaKnown RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TMEM176AQ96HP8 235 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 HPDLQ96IR7 371 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 LHX5Q9H2C1 402 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 DDX56Q9NY93 547 aaKnown RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 KCNH4Q9UQ05 1017 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PPME1Q9Y570 386 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 MED7O43513 233 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ITGAVP06756 1048 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 SSTR1P30872 391 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 ADCYAP1R1P41586 468 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 GPD2P43304 727 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 PHKA2P46019 1235 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 TMEM62Q0P6H9 643 aa12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 EFTUD2Q15029 972 aaKnown RBP eCLIP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 C15orf59Q2T9L4 293 aaPredicted RBP12.39□□□□□ -0.43
HMGN3-AS1-201ENST00000604516 FNBP1LQ5T0N5 605 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms