RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 UPK3BL2E5RIL1 263 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ALDH1A2O94788 518 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CAPNS1P04632 268 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 CKMP06732 381 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 NFICP08651 508 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 HNRNPLP14866 589 aaKnown RBP eCLIP12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 P2RY2P41231 377 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SMTNP53814 917 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 ATXN3P54252 364 aaPredicted RBP12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SCAPQ12770 1279 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SMARCB1Q12824 385 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 EML3Q32P44 896 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SDHAF4Q5VUM1 108 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 LYSMD4Q5XG99 296 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 JADE1Q6IE81 842 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 KCNK18Q7Z418 384 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 EFCAB13Q8IY85 973 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 THEM5Q8N1Q8 247 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 HDDC3Q8N4P3 179 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 FRMD1Q8N878 549 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 SLC22A12Q96S37 553 aa12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 PYM1Q9BRP8 204 aaKnown RBP12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 NTPCRQ9BSD7 190 aaKnown RBP12.71□□□□□ -0.37
PDLIM1P1-201ENST00000604187 KALRNO60229 2985 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TRAV19A0A0A6YYK7 116 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 K7EQS6 105 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 CYB561D2O14569 222 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 HNRNPDLO14979 420 aaKnown RBP12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 FAM189A1O60320 539 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TADA3O75528 432 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 CSH1P0DML2 217 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 CSH2P0DML3 217 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 ITPKAP23677 461 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 PAX3P23760 479 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 GUCY2CP25092 1073 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 OPRD1P41143 372 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 NR1H3Q13133 447 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 NBR1Q14596 966 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 ANKRD1Q15327 319 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 KYAT1Q16773 422 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 ME3Q16798 604 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 ZNF423Q2M1K9 1284 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 WSCD1Q658N2 575 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 LMBRD2Q68DH5 695 aaPredicted RBP12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 SLC23A3Q6PIS1 610 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 RAB44Q7Z6P3 723 aaPredicted RBP12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 DCP1BQ8IZD4 617 aaKnown RBP12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 ALLCQ8N6M5 410 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 SH3RF2Q8TEC5 729 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 WHAMMQ8TF30 809 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TSPAN18Q96SJ8 248 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 CYP2S1Q96SQ9 504 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 PI4K2AQ9BTU6 479 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TIPINQ9BVW5 301 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TMEM206Q9H813 350 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 RPF1Q9H9Y2 349 aaKnown RBP12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TMLHEQ9NVH6 421 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 BCCIPQ9P287 314 aaKnown RBP eCLIP12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 PCDHB5Q9Y5E4 795 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 CELSR3Q9NYQ7 3312 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 APC2O95996 2303 aa12.7□□□□□ -0.38
PDLIM1P1-201ENST00000604187 PIRO00625 290 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 OPHN1O60890 802 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 PRPF40AO75400 957 aaKnown RBP12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 NFATC1O95644 943 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 USP17L7P0C7H9 530 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 DPP6P42658 865 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 LIG4P49917 911 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 GFPT1Q06210 699 aaPredicted RBP12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TMEM132DQ14C87 1099 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 DDR2Q16832 855 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 ZC2HC1CQ53FD0 456 aaPredicted RBP12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 KRT79Q5XKE5 535 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TMEM92Q6UXU6 159 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 C4orf32Q8N8J7 132 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 IGSF22Q8N9C0 903 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 OR2I1PQ8NGU4 316 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 RAB34Q9BZG1 259 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 LINC00597Q9H2U6 94 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 KCNG1Q9UIX4 513 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 PILRBQ9UKJ0 227 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 STK24Q9Y6E0 443 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 CFAP46Q8IYW2 2715 aa12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 PDCD11Q14690 1871 aaKnown RBP12.69□□□□□ -0.38
PDLIM1P1-201ENST00000604187 ANO9A1A5B4 782 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 SGK1O00141 431 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 OGTO15294 1046 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 NOL4O94818 638 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 KLF8O95600 359 aaPredicted RBP12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 ADRB2P07550 413 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 CDC25AP30304 524 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 HOXD12P35452 270 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TAF6P49848 677 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 TSPY1Q01534 308 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 PDIA5Q14554 519 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 KCNB1Q14721 858 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 ZRSR1Q15695 479 aaKnown RBP12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 MAP7D1Q3KQU3 841 aa12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 PEAR1Q5VY43 1037 aaPredicted RBP12.68□□□□□ -0.38
PDLIM1P1-201ENST00000604187 SFTPA1Q8IWL2 248 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms