RNA–Protein interactions for RNA: ENST00000602898.1

SPTBN1-206, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best)

Gene SPTBN1, Length 2,942 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-206ENST00000602898 EIF3HO15372 352 aaKnown RBP eCLIP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ACSL4O60488 711 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 DIAPH2O60879 1101 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 GADD45BO75293 160 aaPredicted RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 FLOT1O75955 427 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 GLRX3O76003 335 aaKnown RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CHGBP05060 677 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ARAFP10398 606 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 TFE3P19532 575 aaPredicted RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 MTIF2P46199 727 aaKnown RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 AP3M2P53677 418 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 IKQ13123 557 aaPredicted RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 COG2Q14746 738 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 FAM47CQ5HY64 1035 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 LILRA6Q6PI73 481 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 EXOC3L1Q86VI1 746 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 UNC5CLQ8IV45 518 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 SRBD1Q8N5C6 995 aaKnown RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CCDC110Q8TBZ0 833 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 HSPH1Q92598 858 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 EXT2Q93063 718 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 CHFRQ96EP1 664 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 TEKT5Q96M29 485 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 BCL7BQ9BQE9 202 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 LLPHQ9BRT6 129 aaKnown RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 EDEM2Q9BV94 578 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 H2AFY2Q9P0M6 372 aaPredicted RBP5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 FBXL21Q9UKT6 434 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 HCN2Q9UL51 889 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 INVSQ9Y283 1065 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 ATP11BQ9Y2G3 1177 aa5.3□□□□□ -1.56
SPTBN1-206ENST00000602898 A0A0U1RQK1 487 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF320A2RRD8 509 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 C16orf96A6NNT2 1141 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 EML1O00423 815 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ZW10O43264 779 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 TBX1O43435 398 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 PFDN1O60925 122 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 RNGTTO60942 597 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 BCAS2O75934 225 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 PRPF6O94906 941 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 TUBBP07437 444 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CCDC192P0DO97 292 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 FUT4P22083 530 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 S100A1P23297 94 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 TUFMP49411 452 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 HADHBP55084 474 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 TUBA4AP68366 448 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 PLOD1Q02809 727 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CREMQ03060 361 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 LIPEQ05469 1076 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 KLF1Q13351 362 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ADAM15Q13444 863 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 HABP2Q14520 560 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 TRIM71Q2Q1W2 868 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CTXN3Q4LDR2 81 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 FNDC3BQ53EP0 1204 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 HGSNATQ68CP4 663 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 BRINP3Q76B58 766 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ADGRG6Q86SQ4 1221 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ZNF554Q86TJ5 538 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ERICH1Q86X53 443 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 NUDT13Q86X67 352 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 TMEM40Q8WWA1 233 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 DIO2Q92813 273 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 C8orf76Q96K31 380 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 RPGRIP1Q96KN7 1286 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ADAD1Q96M93 576 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 LENG8Q96PV6 779 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 MTMR9Q96QG7 549 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 NUP58Q9BVL2 599 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 MOV10L1Q9BXT6 1211 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 NAT10Q9H0A0 1025 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CD93Q9NPY3 652 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 SH2B1Q9NRF2 756 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 SEPT11Q9NVA2 429 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 C5AR2Q9P296 337 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 SUCLA2Q9P2R7 463 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 PXDNQ92626 1479 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 MYO5BQ9ULV0 1848 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 NRKQ7Z2Y5 1582 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 UBN2Q6ZU65 1347 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CDHR2Q9BYE9 1310 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 MAGEB3O15480 346 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 SOAT2O75908 522 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 TNFRSF6BO95407 300 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 GSNP06396 782 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 IL15P40933 162 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 IRAK1P51617 712 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CARD18P57730 90 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 TRA2BP62995 288 aaKnown RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 MXRA7P84157 204 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CCZ1BP86790 482 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CCZ1P86791 482 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CUL4AQ13619 759 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 CCDC14Q49A88 953 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ACCSLQ4AC99 568 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 ARSJQ5FYB0 599 aaPredicted RBP5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 AADACL4Q5VUY2 407 aa5.29□□□□□ -1.56
SPTBN1-206ENST00000602898 RRAGBQ5VZM2 374 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms